RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 OR4A16Q8NH70 328 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 CLDND2Q8NHS1 167 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 DDB2Q92466 427 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 C5orf30Q96GV9 206 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 GAFA1Q96PS6 74 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 OR4C12Q96R67 309 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 TXNDC17Q9BRA2 123 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 IFI27L2Q9H2X8 130 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 SIRT7Q9NRC8 400 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 FKBP11Q9NYL4 201 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 KAAG1Q9UBP8 84 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 RPUSD1Q9UJJ7 312 aaKnown RBP6.84□□□□□ -1.31
SKA2-203ENST00000578105 ZNF257Q9Y2Q1 563 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 VPS13AQ96RL7 3174 aa6.84□□□□□ -1.31
SKA2-203ENST00000578105 FRYLO94915 3013 aa6.84□□□□□ -1.32
SKA2-203ENST00000578105 WDFY3Q8IZQ1 3526 aa6.84□□□□□ -1.32
SKA2-203ENST00000578105 HEATR1Q9H583 2144 aaKnown RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 IGHV3-64DA0A0J9YX35 117 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 CTXND1A0A1B0GTU2 59 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 LINC00473A8K010 186 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 K7EM74 188 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 M0R1X1 148 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 TGOLN2O43493 480 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 FCGR3BO75015 233 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 RBMXL2O75526 392 aaKnown RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 C1QL1O75973 258 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 ARG1P05089 322 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 SPINK2P20155 84 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 MDKP21741 143 aaPredicted RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 FHITP49789 147 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 BRWD1-AS2P59051 145 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 DLK1P80370 383 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 ADIPOQQ15848 244 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 ACOT6Q3I5F7 207 aaPredicted RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 ZNRF1Q8ND25 227 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 ZNF439Q8NDP4 499 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 RAB1CQ92928 201 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 MANBALQ9NQG1 85 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 TMEM242Q9NWH2 141 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 MLXQ9UH92 298 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 VAX2Q9UIW0 290 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 PRNDQ9UKY0 176 aa6.83□□□□□ -1.32
SKA2-203ENST00000578105 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 EP300Q09472 2414 aaPredicted RBP6.83□□□□□ -1.32
SKA2-203ENST00000578105 PPIAL4EA0A075B759 164 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 IGHV3-43A0A0B4J1X8 118 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 C7orf77A4D0Y5 90 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 DPRXA6NFQ7 191 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 B9A039 149 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 C9JQL5 133 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 TMEM250H0YL14 139 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 H3BP45 60 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 GPR37O15354 613 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 CYB5BO43169 146 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 PAX4O43316 350 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 TSPAN9O75954 239 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 IFNA17P01571 189 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 OR4A8P0C604 315 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 PPIAL4FP0DN26 164 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 IGHV3-43DP0DP04 118 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 BCL2P10415 239 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 ID4P47928 161 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 RAB5BP61020 215 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 RUNX1Q01196 453 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 ARL16Q0P5N6 197 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 ICAM4Q14773 271 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 SSX2Q16385 188 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 RTL8BQ17RB0 113 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 AWAT1Q58HT5 328 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 NCMAPQ5T1S8 102 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 NCR3LG1Q68D85 454 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 SLC25A48Q6ZT89 311 aaKnown RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 HAPLN4Q86UW8 402 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 WFDC8Q8IUA0 241 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 LINC00311Q8N616 119 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 TPRX1Q8N7U7 411 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 OSR1Q8TAX0 266 aaPredicted RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 UBALD1Q8TB05 177 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 ZNF596Q8TC21 504 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 SNRNP40Q96DI7 357 aaKnown RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 MALSU1Q96EH3 234 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 TVP23CQ96ET8 276 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 NIPSNAP3BQ9BS92 247 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 SCNM1Q9BWG6 230 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 ACTR3CQ9C0K3 210 aaPredicted RBP6.82□□□□□ -1.32
SKA2-203ENST00000578105 SAP30LQ9HAJ7 183 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 BIN3Q9NQY0 253 aa6.82□□□□□ -1.32
SKA2-203ENST00000578105 RPRMQ9NS64 109 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms