RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 C1SP09871 688 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 ATP5IP56385 69 aaPredicted RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 TRA2AQ13595 282 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDH8-203ENST00000577390 CDK5R1Q15078 307 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 UNQ5815/PRO19632Q6UWF5 114 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 OR1L6Q8NGR2 347 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 COL14A1Q05707 1796 aaKnown RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 KLK8O60259 260 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 TRGC1P0CF51 173 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 UBE2V1Q13404 147 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 SRSF7Q16629 238 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDH8-203ENST00000577390 ROS1P08922 2347 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 C7orf71A4D174 169 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 OR2W5A6NFC9 320 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 H0Y8X5 98 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 ISG15P05161 165 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 EIF3IQ13347 325 aaKnown RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 MED29Q9NX70 200 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 TGFAP01135 160 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 RIPPLY3P57055 190 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 C1orf174Q8IYL3 243 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 PRSS16Q9NQE7 514 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 MRPL16Q9NX20 251 aaKnown RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 C16orf97H3BN30 126 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 ZNF117Q03924 483 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 OR10J3Q5JRS4 329 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 CD200R1LQ6Q8B3 271 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 TRGV4A0A0C4DH28 118 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 TAPBPO15533 448 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 APCSP02743 223 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 Q96M85 177 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 H3BMH7 237 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 LIPFP07098 398 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 FAM78BQ5VT40 261 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 MBNL2Q5VZF2 373 aaKnown RBP7.75□□□□□ -1.17
CDH8-203ENST00000577390 HEPN1Q6WQI6 88 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 RPS4Y2Q8TD47 263 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 ANAPC10Q9UM13 185 aa7.75□□□□□ -1.17
CDH8-203ENST00000577390 RER1O15258 196 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 CD74P04233 296 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 MRPS11P82912 194 aaKnown RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 SOSTQ9BQB4 213 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 CACNA1HO95180 2353 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 ZSWIM8A7E2V4 1837 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 SLC17A3O00476 420 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 NAPSAO96009 420 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 SPINK2P20155 84 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 ERVS71-1P61550 626 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 MGAT2Q10469 447 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 TMEM241Q24JQ0 296 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 CYSLTR1Q9Y271 337 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 A0A1B0GTL3 188 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 PDLIM4P50479 330 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 OR1F12Q8NHA8 337 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 VN1R1Q9GZP7 353 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 NRAPQ86VF7 1730 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 ALG1L2C9J202 215 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 ERGP11308 486 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 LHFPL4Q7Z7J7 247 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 SNHG12Q9BXW3 62 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 TMEM167BQ9NRX6 74 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 MDH2P40926 338 aaKnown RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 ZNF740Q8NDX6 193 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 HSF4Q9ULV5 492 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 HIST1H4AP62805 103 aaKnown RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 MRAPQ8TCY5 172 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 C4orf45Q96LM5 186 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 MBLAC1A4D2B0 266 aaPredicted RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 MPV17LQ2QL34 196 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 CNOT1A5YKK6 2376 aaKnown RBP7.74□□□□□ -1.17
CDH8-203ENST00000577390 CTAG2O75638 210 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 TMEM126AQ9H061 195 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 MANBALQ9NQG1 85 aa7.74□□□□□ -1.17
CDH8-203ENST00000577390 CST5P28325 142 aaPredicted RBP7.73□□□□□ -1.17
CDH8-203ENST00000577390 Q7L0L9 218 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 ZNF385AQ96PM9 386 aaKnown RBP7.73□□□□□ -1.17
CDH8-203ENST00000577390 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
CDH8-203ENST00000577390 A0A087WX48 190 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 TCRBV4S1A1TA0A5B7 111 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 ZNF253O75346 499 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 ATP5LO75964 103 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 C10orf91Q5T1B1 145 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 GFI1BQ5VTD9 330 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 CDX2Q99626 313 aaPredicted RBP7.73□□□□□ -1.17
CDH8-203ENST00000577390 ARHGAP32A7KAX9 2087 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 WDR87Q6ZQQ6 2873 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 MS4A6EQ96DS6 147 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 CDC42EP3Q9UKI2 254 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 RPL31P62899 125 aaKnown RBP7.73□□□□□ -1.17
CDH8-203ENST00000577390 OTPQ5XKR4 325 aa7.73□□□□□ -1.17
CDH8-203ENST00000577390 CA13Q8N1Q1 262 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms