RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TRAV24A0A0B4J272 114 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 A0A1W2PQL4 384 aaPredicted RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 CCDC160A6NGH7 325 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRSS29PA6NIE9 313 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 METTL15A6NJ78 407 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 E9PI62 339 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 H3BMQ9 156 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 M0R129 80 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 SLC31A2O15432 143 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 SPINT2O43291 252 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 ORC5O43913 435 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 CCNKO75909 580 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 ARL6IP5O75915 188 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 IFNA4P05014 189 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 FABP1P07148 127 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 AADACP22760 399 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 MAP2K4P45985 399 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 APOC4P55056 127 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 CX3CL1P78423 397 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRR20EP86478 221 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRR20CP86479 221 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRR20DP86480 221 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRR20BP86481 221 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PRR20AP86496 221 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 EWSR1Q01844 656 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMG6-219ENST00000575663 CD300EQ496F6 205 aaPredicted RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 DMKNQ6E0U4 476 aaPredicted RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 FAM220AQ7Z4H9 259 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 BCDIN3DQ7Z5W3 292 aaKnown RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 LHFPL3Q86UP9 236 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 PPP1R27Q86WC6 154 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 POC5Q8NA72 575 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 OR10H4Q8NGA5 316 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 FAM103A1Q9BTL3 118 aaKnown RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 DPCDQ9BVM2 203 aaPredicted RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 MFFQ9GZY8 342 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 SAV1Q9H4B6 383 aaPredicted RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 PEF1Q9UBV8 284 aaKnown RBP4.43□□□□□ -1.7
SMG6-219ENST00000575663 CLEC2DQ9UHP7 191 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 NUBP2Q9Y5Y2 271 aa4.43□□□□□ -1.7
SMG6-219ENST00000575663 A0A075B6Q4 140 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TRAV1-2A0A0B4J238 106 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TRAV39A0A0B4J263 110 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 MSGN1A6NI15 193 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TMEM212A6NML5 194 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 F8W036 122 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 C15orf65H3BRN8 121 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 AIPO00170 330 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 RRHO14718 337 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 MAGEB4O15481 346 aaPredicted RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 XRCC3O43542 346 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 SPRY2O43597 315 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 SC5DO75845 299 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 MBP02144 154 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 APOA1P02647 267 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 ISG15P05161 165 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TMEM225BP0DP42 221 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 CELP19835 753 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TAGLN2P37802 199 aaKnown RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 NKX2-5P52952 324 aaPredicted RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 VAMP2P63027 116 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 ZNF45Q02386 682 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 ZNF85Q03923 595 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 RBMS2Q15434 407 aaKnown RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 TMEM177Q53S58 311 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 TMEM244Q5VVB8 128 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 STEAP3Q658P3 488 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 PET117Q6UWS5 81 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 Q6ZWC4 215 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 OR10V1Q8NGI7 309 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 OR13C9Q8NGT0 318 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 UBALD1Q8TB05 177 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 NEK7Q8TDX7 302 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 C2CD4CQ8TF44 421 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 AP3S1Q92572 193 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 SMIM19Q96E16 107 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 ADAT3Q96EY9 351 aaPredicted RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 PELI1Q96FA3 418 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 ABHD14AQ9BUJ0 271 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 MRPL20Q9BYC9 149 aaKnown RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 FBXL15Q9H469 300 aa4.42□□□□□ -1.7
SMG6-219ENST00000575663 CHMP1AQ9HD42 196 aaPredicted RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 MRPS7Q9Y2R9 242 aaKnown RBP4.42□□□□□ -1.7
SMG6-219ENST00000575663 PNMA8CA0A1B0GUJ8 204 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ZNF785A8K8V0 405 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 J3QLW9 94 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 UBE2CO00762 179 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 OR7C1O76099 320 aaPredicted RBP4.41□□□□□ -1.7
SMG6-219ENST00000575663 SPDEFO95238 335 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 ZNF19P17023 458 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 TALDO1P37837 337 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 LGALS7P47929 136 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 CAMLGP49069 296 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 HOXA1P49639 335 aaPredicted RBP4.41□□□□□ -1.7
SMG6-219ENST00000575663 RORCP51449 518 aa4.41□□□□□ -1.7
SMG6-219ENST00000575663 SCAND1P57086 179 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms