RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZNF665Q9H7R5 613 aa19.53■□□□□ 0.72
NPLOC4-217ENST00000574897 GFOD1Q9NXC2 390 aa19.53■□□□□ 0.72
NPLOC4-217ENST00000574897 RBFOX3A6NFN3 312 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 FBP1P09467 338 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 IRF2P14316 349 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 ZNF726P1Q15940 193 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 SLC35B3Q9H1N7 401 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 ZNRD1Q9P1U0 126 aa19.52■□□□□ 0.72
NPLOC4-217ENST00000574897 TRGV10A0A0A0MS01 117 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 PMS2P5A8MQ11 134 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 CEBPZOSA8MTT3 80 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 TMPRSS2O15393 492 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 GNG10P50151 68 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 RAXQ9Y2V3 346 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 SAA2-SAA4A0A096LPE2 208 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 TRAV3A0A0B4J244 114 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 SAA2P0DJI9 122 aaPredicted RBP19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 ELLP55199 621 aaPredicted RBP19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 NHLH1Q02575 133 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 HFEQ30201 348 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 RND1Q92730 232 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 LAMP3Q9UQV4 416 aa19.51■□□□□ 0.71
NPLOC4-217ENST00000574897 FCN3O75636 299 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 TLE1Q04724 770 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 AWAT1Q58HT5 328 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 KIAA1456Q9P272 454 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 GFRA3O60609 400 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 HPRT1P00492 218 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 SNRNP70P08621 437 aaKnown RBP19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 TLE4Q04727 773 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 TEX36Q5VZQ5 186 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 CD300LFQ8TDQ1 290 aa19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 TAF15Q92804 592 aaKnown RBP eCLIP19.5■□□□□ 0.71
NPLOC4-217ENST00000574897 TRGV8A0A0C4DH27 118 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 A0A1B0GW64 132 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 DAOP14920 347 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 FGF8P55075 233 aaPredicted RBP19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 PRAMEF5Q5TYX0 476 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 RPS10P5Q9NQ39 176 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 NDUFB7P17568 137 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 CEBPGP53567 150 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 LCN15Q6UWW0 184 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 RXFP4Q8TDU9 374 aa19.49■□□□□ 0.71
NPLOC4-217ENST00000574897 TNFRSF1AP19438 455 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 ICAM4Q14773 271 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 LYG1Q8N1E2 194 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 DDB2Q92466 427 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 S1PR3Q99500 378 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 ZNF251Q9BRH9 671 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 PSMG3Q9BT73 122 aaPredicted RBP19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 NCOR1P1Q9H4R4 102 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 LRBAP50851 2863 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 M0R036 132 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 CLDND2Q8NHS1 167 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 SAP30LQ9HAJ7 183 aa19.48■□□□□ 0.71
NPLOC4-217ENST00000574897 TNCP24821 2201 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 IFNA17P01571 189 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 TMPRSS3P57727 454 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 TFF3Q07654 80 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 DMRTC2Q8IXT2 367 aaPredicted RBP19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 ZNF439Q8NDP4 499 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 CLCC1Q96S66 551 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 IDI2-AS1Q9NZ38 188 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 BTBD17A6NE02 478 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 SHISA9B4DS77 424 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 IGKV1D-33P01593 117 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 IGKV1-33P01594 117 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 RBPJQ06330 500 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 DPPA3Q6W0C5 159 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 CCL17Q92583 94 aa19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 RCC1LQ96I51 464 aaKnown RBP19.47■□□□□ 0.71
NPLOC4-217ENST00000574897 C7orf77A4D0Y5 90 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 E7EQL1 145 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 SCAF4O95104 1147 aaKnown RBP19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 SRP19P09132 144 aaKnown RBP19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 PRELID3BQ9Y3B1 194 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 C15orf62A8K5M9 175 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 OR8U8P0C7N1 319 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 RAB2AP61019 212 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 GNG13Q9P2W3 67 aa19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 PUS1Q9Y606 427 aaKnown RBP eCLIP19.46■□□□□ 0.71
NPLOC4-217ENST00000574897 RAB7AP51149 207 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 SOHLH1Q5JUK2 328 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 ACSM6Q6P461 480 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 ZNF383Q8NA42 475 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 OR10P1Q8NGE3 313 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 TMEM140Q9NV12 185 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 NDRG3Q9UGV2 375 aa19.45■□□□□ 0.7
NPLOC4-217ENST00000574897 ZNF729A6NN14 1252 aaPredicted RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 MRPS11P82912 194 aaKnown RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 RELBQ01201 579 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 OR4A16Q8NH70 328 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 VKORC1Q9BQB6 163 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 SLC25A10Q9UBX3 287 aaPredicted RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 ZNF787Q6DD87 383 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 LYPD2Q6UXB3 125 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 CYB561D1Q8N8Q1 229 aa19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 RNASE6Q93091 150 aaKnown RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 CIB3Q96Q77 187 aaPredicted RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 TMEM147Q9BVK8 224 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms