RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 A0A1W2PPV4 95 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 FAM90A26D6RGX4 464 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
SMG6-215ENST00000574501 K7EN84 100 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 COL8A2P25067 703 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 TGFBR3Q03167 851 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 Q0VG73 95 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 SSPNQ14714 243 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 AAED1Q7RTV5 226 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 C1QTNF5Q9BXJ0 243 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 DLL3Q9NYJ7 618 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 ODAMA1E959 279 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 RBMXL2O75526 392 aaKnown RBP12.1□□□□□ -0.47
SMG6-215ENST00000574501 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 AKIRIN1Q9H9L7 192 aaPredicted RBP12.1□□□□□ -0.47
SMG6-215ENST00000574501 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 C17orf112F2Z3M2 114 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 DEGS1O15121 323 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 LGALS4P56470 323 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 SLC35B1P78383 322 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 ERASQ7Z444 233 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 ST6GALNAC3Q8NDV1 305 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 COX11Q9Y6N1 276 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 NBEAQ8NFP9 2946 aa12.1□□□□□ -0.47
SMG6-215ENST00000574501 A0A1W2PS18 150 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 K7EP13 123 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 ZNF253O75346 499 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 LIFP15018 202 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 TRIP6Q15654 476 aaKnown RBP12.09□□□□□ -0.47
SMG6-215ENST00000574501 FAM53AQ6NSI3 398 aaPredicted RBP12.09□□□□□ -0.47
SMG6-215ENST00000574501 OR8I2Q8N0Y5 310 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 Q8N7P7 452 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 DEPPQ9NTK1 212 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 A0A1W2PR77 199 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 GDF9O60383 454 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 ZNF83P51522 516 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
SMG6-215ENST00000574501 ZNF808Q8N4W9 903 aaPredicted RBP12.09□□□□□ -0.47
SMG6-215ENST00000574501 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
SMG6-215ENST00000574501 A0A096LPE4 126 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 DPRXA6NFQ7 191 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 M0QZ24 198 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 RRHO14718 337 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 PCBD1P61457 104 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
SMG6-215ENST00000574501 MMD2Q8IY49 270 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 OR2M7Q8NG81 312 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 UHRF2Q96PU4 802 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 RNF24Q9Y225 148 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 TRBV6-6A0A0A6YYG2 114 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 C5orf49A4QMS7 147 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 SCRG1O75711 98 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 RHBDL1O75783 438 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 S1PR2O95136 353 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 TSPOP30536 169 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.48
SMG6-215ENST00000574501 HTD2P86397 168 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 YRDCQ86U90 279 aaKnown RBP12.08□□□□□ -0.48
SMG6-215ENST00000574501 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 PRDM14Q9GZV8 571 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 PROK2Q9HC23 129 aa12.08□□□□□ -0.48
SMG6-215ENST00000574501 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.08□□□□□ -0.48
SMG6-215ENST00000574501 YTHDF2Q9Y5A9 579 aaKnown RBP12.08□□□□□ -0.48
SMG6-215ENST00000574501 TOMM40O96008 361 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 IGLV3-19P01714 112 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 GFRA1P56159 465 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 RAC1P63000 192 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 RAB30Q15771 203 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 RPEL1Q2QD12 228 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 LCN12Q6JVE5 192 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 RABEPKQ7Z6M1 372 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 FAM58AQ8N1B3 248 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 KCNS1Q96KK3 526 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 R4GN57 208 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 ZNF716A6NP11 495 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 CXCL13O43927 109 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 NGFP01138 241 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 NTF3P20783 257 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 LINC00205P59089 165 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 RPL31P62899 125 aaKnown RBP12.07□□□□□ -0.48
SMG6-215ENST00000574501 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 FBLN7Q53RD9 439 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
SMG6-215ENST00000574501 CBY3A6NI87 242 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 NXPH2O95156 264 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 CA6P23280 308 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 CD1BP29016 333 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms