RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 BRWD1-AS2P59051 145 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 UBE2KP61086 200 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 MORN2Q502X0 79 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 ZNF561Q8N587 486 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 FAM216BQ8N7L0 139 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 ZNF383Q8NA42 475 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 SDSLQ96GA7 329 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 COA4Q9NYJ1 87 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 HMGB3O15347 200 aaKnown RBP8.68□□□□□ -1.02
USP43-205ENST00000574408 TNFRSF1AP19438 455 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 CASP6P55212 293 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 MSMO1Q15800 293 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 Q8TCH9 128 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 GAFA1Q96PS6 74 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 HSD17B10Q99714 261 aaKnown RBP8.68□□□□□ -1.02
USP43-205ENST00000574408 PSENENQ9NZ42 101 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 WSB1Q9Y6I7 421 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
USP43-205ENST00000574408 ABCA4P78363 2273 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 GUK1Q16774 197 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 ZNF66Q6ZN08 573 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 SSX8Q7RTT4 187 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 OR2G3Q8NGZ4 309 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 NGBQ9NPG2 151 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 CACFD1Q9UGQ2 172 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 F2RL2O00254 374 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 CYB5BO43169 146 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 CLDN14O95500 239 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 SULT1A1P50225 295 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 LOXL3P58215 753 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 HABP2Q14520 560 aaPredicted RBP8.67□□□□□ -1.02
USP43-205ENST00000574408 CR1LQ2VPA4 569 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 LEAP2Q969E1 77 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 FAM234AQ9H0X4 552 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 ZNF665Q9H7R5 613 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 M0R1X1 148 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 YPEL1O60688 119 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 IFNA17P01571 189 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 METTL15P1P0C7V9 234 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 RUNX1Q01196 453 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 NEUROG1Q92886 237 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 YPEL2Q96QA6 119 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 ATP5SQ99766 215 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 RARRES2Q99969 163 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 ZNF251Q9BRH9 671 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 C19orf12Q9NSK7 152 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 TRGV10A0A0A0MS01 117 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 LRRC30A6NM36 301 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 VSTM5A8MXK1 200 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 SOX15O60248 233 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 CLN5O75503 358 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
USP43-205ENST00000574408 RPS16P62249 146 aaKnown RBP8.67□□□□□ -1.02
USP43-205ENST00000574408 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 UTF1Q5T230 341 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 ZNF788Q6ZQV5 615 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 DIRC2Q96SL1 478 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 SAP30LQ9HAJ7 183 aa8.67□□□□□ -1.02
USP43-205ENST00000574408 PROP1O75360 226 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
USP43-205ENST00000574408 RAB5CP51148 216 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 ZNF134P52741 427 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 TNFRSF9Q07011 255 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 RPL39P5Q59GN2 51 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 H2BFWTQ7Z2G1 175 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 SSX3Q99909 188 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 STRAPQ9Y3F4 350 aaKnown RBP8.66□□□□□ -1.02
USP43-205ENST00000574408 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 A0A0U1RQK1 487 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 TMPRSS2O15393 492 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 SLC31A2O15432 143 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 FCGR3BO75015 233 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 P0C879 139 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 KLRB1Q12918 225 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 GPR61Q9BZJ8 451 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 EGLN1Q9GZT9 426 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 RBKSQ9H477 322 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 DYNLRB1Q9NP97 96 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
USP43-205ENST00000574408 KBTBD11-OT1A0A1B0GTJ5 212 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 FAM90A26D6RGX4 464 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 DFFBO76075 338 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 IFNA4P05014 189 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 CD55P08174 381 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 CGB3P0DN86 165 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 CGB7P0DN87 165 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 NDUFB7P17568 137 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 RAB5AP20339 215 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 CA7P43166 264 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 GFI1BQ5VTD9 330 aa8.66□□□□□ -1.02
USP43-205ENST00000574408 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms