RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 PAX5Q02548 391 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 ENDOGQ14249 297 aaKnown RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 MOB3BQ86TA1 216 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 TBX15Q96SF7 602 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 CLCF1Q9UBD9 225 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 CARHSP1Q9Y2V2 147 aaKnown RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 LRRK2Q5S007 2527 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 TMEM30CPA0ZSE6 113 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 SELLP14151 372 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 HIST1H1BP16401 226 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 PMCHP20382 165 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 FAM3AP98173 230 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 VN1R17PQ8TDU5 208 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 ATP5SQ99766 215 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 MED12LQ86YW9 2145 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 K7ENP7 123 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 SCGB2A1O75556 95 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 MT-CO2P00403 227 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 APOA2P02652 100 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 INO80CQ6PI98 192 aaPredicted RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 LIAT1Q6ZQX7 453 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 FAM214BQ7L5A3 538 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 ERASQ7Z444 233 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 ZNRF1Q8ND25 227 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 CPEB3Q8NE35 698 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 OR1L1Q8NH94 360 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 C22orf15Q8WYQ4 148 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 GTF3AQ92664 365 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 EGLN1Q9GZT9 426 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 ZDHHC11Q9H8X9 412 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 FASNP49327 2511 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 ELOA3CA0A087WX78 387 aaPredicted RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 A0A1B0GTI1 187 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 E9PQ18 207 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 G3V3Q6 166 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 HAND1O96004 215 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 RBM11P57052 281 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 HIST1H3AP68431 136 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 ZNF90Q03938 601 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 TEX30Q5JUR7 227 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 LY6G6FQ5SQ64 297 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 HOGA1Q86XE5 327 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 RNF138Q8WVD3 245 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 CCL13Q99616 98 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 OR51I2Q9H344 312 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 LIN7CQ9NUP9 197 aaKnown RBP6.42□□□□□ -1.38
RPA1-207ENST00000574049 GPR132Q9UNW8 380 aa6.42□□□□□ -1.38
RPA1-207ENST00000574049 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 NAV2Q8IVL1 2488 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 IGKV3-7A0A075B6H7 116 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 PLAUP00749 431 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 TFPI2P48307 235 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 KLF3P57682 345 aaPredicted RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 EWSR1Q01844 656 aaKnown RBP eCLIP6.41□□□□□ -1.38
RPA1-207ENST00000574049 OR10A7Q8NGE5 316 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 PARP11Q9NR21 331 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 PITPNC1Q9UKF7 332 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 POLQO75417 2590 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 MDFIC2A0A1B0GVS7 189 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 MAP1LC3B2A6NCE7 125 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 H3BTX0 84 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 IGHV2-70P01814 119 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 HOXA5P20719 270 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 GALR1P47211 349 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 SULT1A2P50226 295 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 SSBP1Q04837 148 aaKnown RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 SLC38A11Q08AI6 406 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 FFAR4Q5NUL3 377 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 Q6ZN92 141 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 Q6ZS92 163 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 NTNG2Q96CW9 530 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 PERPQ96FX8 193 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 CITED1Q99966 193 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 MAP1LC3BQ9GZQ8 125 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 TECRQ9NZ01 308 aaKnown RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 TMED3Q9Y3Q3 217 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 ATMQ13315 3056 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 KMT2EQ8IZD2 1858 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 TRGV10A0A0A0MS01 117 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 NCBP2LA6PVI3 153 aaKnown RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 THBDP07204 575 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 CTSDP07339 412 aaPredicted RBP6.41□□□□□ -1.38
RPA1-207ENST00000574049 SSTR5P35346 364 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 GLIPR1P48060 266 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 CAMPP49913 170 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 UCP2P55851 309 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 GNB2P62879 340 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 MZT1Q08AG7 82 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 FAM27E3Q08E93 113 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 C1orf100Q5SVJ3 147 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 FAM78BQ5VT40 261 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 SIGLECL1Q8N7X8 197 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 GNB4Q9HAV0 340 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 CACFD1Q9UGQ2 172 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 TRAPPC1Q9Y5R8 145 aa6.41□□□□□ -1.38
RPA1-207ENST00000574049 CHD3Q12873 2000 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms