RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CD177Q8N6Q3 437 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 OR1L8Q8NGR8 309 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 MALSU1Q96EH3 234 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 COA4Q9NYJ1 87 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 METTL15P1P0C7V9 234 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 OR13C7P0DN81 318 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 CCKARP32238 428 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 RAB5CP51148 216 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 OR5M8Q8NGP6 311 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 OR2G3Q8NGZ4 309 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 NKX6-2Q9C056 277 aaPredicted RBP8.44□□□□□ -1.06
SMG6-213ENST00000573166 TLNRD1Q9H1K6 362 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 DCAF16Q9NXF7 216 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 JTBO76095 146 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 HBE1P02100 147 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 CD74P04233 296 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 SOD3P08294 240 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 AKR1C3P42330 323 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 ZNF818PQ6ZRF7 136 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 ALX4Q9H161 411 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 PATZ1Q9HBE1 687 aaKnown RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 NPDC1Q9NQX5 325 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 USP9YO00507 2555 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 TSTD3H0UI37 97 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 J3QR06 171 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 LY86O95711 162 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 H2BFSP57053 126 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 EFNB3Q15768 340 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 Q56UQ5 140 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 NHLRC3Q5JS37 347 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 C11orf87Q6NUJ2 197 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 ACSM6Q6P461 480 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 TCTEX1D1Q8N7M0 179 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 METTL1Q9UBP6 276 aaKnown RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 KLF2Q9Y5W3 355 aaPredicted RBP8.43□□□□□ -1.06
SMG6-213ENST00000573166 TLN2Q9Y4G6 2542 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 H0Y980 276 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 CDS2O95674 445 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 RBP4P02753 201 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 FBP1P09467 338 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 FAM166AQ6J272 317 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 PCSK4Q6UW60 755 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 ZNF843Q8N446 348 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 DTD1Q8TEA8 209 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 ASB13Q8WXK3 278 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 FRZBQ92765 325 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 C19orf12Q9NSK7 152 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 IGKV1D-17A0A075B6S4 117 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 FAM24AA6NFZ4 105 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 KCNRGQ8N5I3 272 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 TMEM222Q9H0R3 208 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 PPP1R14DQ9NXH3 145 aa8.43□□□□□ -1.06
SMG6-213ENST00000573166 CHST1O43916 411 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 NMBP08949 121 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
SMG6-213ENST00000573166 LYPD2Q6UXB3 125 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 OR2C3Q8N628 320 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 OR10A7Q8NGE5 316 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 OR4C13Q8NGP0 309 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 PARP11Q9NR21 331 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 OPN4Q9UHM6 478 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 B4DSR2 109 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 TAAR5O14804 337 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 SCAF4O95104 1147 aaKnown RBP8.42□□□□□ -1.06
SMG6-213ENST00000573166 TAS2R30P59541 319 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 FBXL19-AS1Q494R0 122 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 CST9LP1Q5W188 147 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 ATRAIDQ6UW56 229 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 FGFRL1Q8N441 504 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 TMEM133Q9H2Q1 129 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 KPTNQ9Y664 436 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 A0A1B0GU03 582 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 NDUFS7O75251 213 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
SMG6-213ENST00000573166 GNPNAT1Q96EK6 184 aaPredicted RBP8.42□□□□□ -1.06
SMG6-213ENST00000573166 ABCA2Q9BZC7 2435 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 UCP3P55916 312 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 ZNF788Q6ZQV5 615 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 MMD2Q8IY49 270 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 DPF1Q92782 380 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 NIPSNAP3BQ9BS92 247 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 UQCC1Q9NVA1 299 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 HIF1ANQ9NWT6 349 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 RPUSD1Q9UJJ7 312 aaKnown RBP8.41□□□□□ -1.06
SMG6-213ENST00000573166 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 LDLRAD4O15165 306 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 SLC25A16P16260 332 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 RPL8P62917 257 aaKnown RBP8.41□□□□□ -1.06
SMG6-213ENST00000573166 Q5PR19 223 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 H1FOOQ8IZA3 346 aaPredicted RBP8.41□□□□□ -1.06
SMG6-213ENST00000573166 ZNF292O60281 2723 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 TRAV40A0A0B4J280 105 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 M0QZ24 198 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms