RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SLC25A17O43808 307 aa13.39□□□□□ -0.27
SMG6-212ENST00000573153 CBX3Q13185 183 aa13.39□□□□□ -0.27
SMG6-212ENST00000573153 ECSCRQ19T08 205 aa13.39□□□□□ -0.27
SMG6-212ENST00000573153 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
SMG6-212ENST00000573153 RBM7Q9Y580 266 aaKnown RBP13.39□□□□□ -0.27
SMG6-212ENST00000573153 TRAV18A0A075B6X5 111 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 A0A1W2PN81 502 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 LINC00473A8K010 186 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 IGLV2-14P01704 120 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 CHRNA7P36544 502 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 RPS19P39019 145 aaKnown RBP13.38□□□□□ -0.27
SMG6-212ENST00000573153 PJVKQ0ZLH3 352 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 C11orf87Q6NUJ2 197 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 OVCH2Q7RTZ1 564 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 HOGA1Q86XE5 327 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 BVESQ8NE79 360 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 DPF1Q92782 380 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 HARBI1Q96MB7 349 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
SMG6-212ENST00000573153 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
SMG6-212ENST00000573153 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
SMG6-212ENST00000573153 XRCC3O43542 346 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 BRI3O95415 125 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 NFYAP23511 347 aaPredicted RBP13.37□□□□□ -0.27
SMG6-212ENST00000573153 TGFBR1P36897 503 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
SMG6-212ENST00000573153 MSMO1Q15800 293 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 ACTBL2Q562R1 376 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 TEX45Q8NA69 505 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 BEST4Q8NFU0 473 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 OSR1Q8TAX0 266 aaPredicted RBP13.37□□□□□ -0.27
SMG6-212ENST00000573153 TMEM68Q96MH6 324 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 CLCC1Q96S66 551 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 SLA2Q9H6Q3 261 aa13.37□□□□□ -0.27
SMG6-212ENST00000573153 RBMX2Q9Y388 322 aaKnown RBP13.37□□□□□ -0.27
SMG6-212ENST00000573153 IGKV1D-13A0A0B4J2D9 117 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 H3BUA1 57 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 SHOXO15266 292 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 IGKV1-13P0DP09 117 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 CBX5P45973 191 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 RAB25P57735 213 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 UBE2KP61086 200 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 DGCR2P98153 550 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 FXYD3Q14802 87 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 UBE2NLQ5JXB2 153 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 UNQ5815/PRO19632Q6UWF5 114 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 LFNGQ8NES3 379 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 OR1N2Q8NGR9 330 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
SMG6-212ENST00000573153 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
SMG6-212ENST00000573153 LGALS1P09382 135 aaKnown RBP13.35□□□□□ -0.27
SMG6-212ENST00000573153 VMA21Q3ZAQ7 101 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 C9orf66Q5T8R8 295 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 OR13F1Q8NGS4 319 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 ABHD5Q8WTS1 349 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 DCUN1D4Q92564 292 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 S100A16Q96FQ6 103 aaKnown RBP13.35□□□□□ -0.27
SMG6-212ENST00000573153 RHOVQ96L33 236 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 HSD17B10Q99714 261 aaKnown RBP13.35□□□□□ -0.27
SMG6-212ENST00000573153 B9D2Q9BPU9 175 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 A3GALT2U3KPV4 340 aa13.35□□□□□ -0.27
SMG6-212ENST00000573153 IGHV4OR15-8A0A075B7B6 117 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 A0A087WW49 117 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 RBMXL2O75526 392 aaKnown RBP13.34□□□□□ -0.27
SMG6-212ENST00000573153 CRYZL1O95825 349 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 SLURP1P55000 103 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 GVQW1Q8N7I0 195 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 SNAPC3Q92966 411 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
SMG6-212ENST00000573153 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 PRELID3BQ9Y3B1 194 aa13.34□□□□□ -0.27
SMG6-212ENST00000573153 RYR3Q15413 4870 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 RAMP3O60896 148 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 CNIH1O95406 144 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 CD40LGP29965 261 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 INSL3P51460 131 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 ARPC4P59998 168 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 LSM3P62310 102 aaKnown RBP13.33□□□□□ -0.28
SMG6-212ENST00000573153 RPL30P62888 115 aaKnown RBP13.33□□□□□ -0.28
SMG6-212ENST00000573153 PRSS8Q16651 343 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 ZNF66Q6ZN08 573 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 KCTD9Q7L273 389 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 POC5Q8NA72 575 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 GRPEL2Q8TAA5 225 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 CMTM3Q96MX0 182 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 PRR25Q96S07 402 aa13.33□□□□□ -0.28
SMG6-212ENST00000573153 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
SMG6-212ENST00000573153 SAMD12Q8N8I0 201 aa13.32□□□□□ -0.28
SMG6-212ENST00000573153 ZBTB34Q8NCN2 500 aa13.32□□□□□ -0.28
SMG6-212ENST00000573153 OR5AP2Q8NGF4 316 aa13.32□□□□□ -0.28
SMG6-212ENST00000573153 GIMAP1Q8WWP7 306 aa13.32□□□□□ -0.28
SMG6-212ENST00000573153 LINC01619G3V211 115 aa13.31□□□□□ -0.28
SMG6-212ENST00000573153 CREBL2O60519 120 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms