RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TNFSF12O43508 249 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 MED6O75586 246 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF682O95780 498 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 CYB5R3P00387 301 aaPredicted RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SLC25A4P12235 298 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 TPT1P13693 172 aaKnown RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 PRPS1L1P21108 318 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 GLRA1P23415 457 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 S100A3P33764 101 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 KDELR2P33947 212 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 TGFBR1P36897 503 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 CDKN1BP46527 198 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 GNG10P50151 68 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 CCR6P51684 374 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 CRISP1P54107 249 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ARF6P62330 175 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 RANP62826 216 aaKnown RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 PJVKQ0ZLH3 352 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 PLECQ15149 4684 aaKnown RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 RFTN2Q52LD8 501 aaPredicted RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 AKR1C8PQ5T2L2 129 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF660Q6AZW8 331 aaPredicted RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 OR10K2Q6IF99 312 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 Q6ZTC4 211 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SLC35D2Q76EJ3 337 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SSX6Q7RTT6 188 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SLC16A14Q7RTX9 510 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ABHD12BQ7Z5M8 362 aaPredicted RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 GPR137CQ8N3F9 429 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 KCNRGQ8N5I3 272 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 INO80EQ8NBZ0 244 aaPredicted RBP4.17□□□□□ -1.74
SF3B3-214ENST00000572365 OR10G2Q8NGC3 310 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 OR5AK3PQ8NH89 298 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 C11orf40Q8WZ69 217 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM45BQ96B21 275 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 HAVCR1Q96D42 359 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ATF6BQ99941 703 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF426Q9BUY5 554 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 CHST5Q9GZS9 411 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 C20orf85Q9H1P6 137 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 PLEKHA1Q9HB21 404 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 TREM1Q9NP99 234 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 UQCC1Q9NVA1 299 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 MDFICQ9P1T7 246 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 HDGFL3Q9Y3E1 203 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 KMT2AQ03164 3969 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SORL1Q92673 2214 aa4.17□□□□□ -1.74
SF3B3-214ENST00000572365 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR2AT4A6NND4 320 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TAAR5O14804 337 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 FGF16O43320 207 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 BCL2L11O43521 198 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 EIF4E2O60573 245 aaKnown RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TXNDC12O95881 172 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OPN1SWP03999 348 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR5AC1P0C628 307 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 LINC00032P0C843 101 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 MUC1P15941 1255 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 CXCL2P19875 107 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 RAB5AP20339 215 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 GSTM3P21266 225 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 IFNGR2P38484 337 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 LUMP51884 338 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 EFNB2P52799 333 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 CLDN8P56748 225 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 MTPNP58546 118 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 RPS20P60866 119 aaKnown RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ERVK-16P61578 105 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF763Q0D2J5 394 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 PPP1R8Q12972 351 aaKnown RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 RSU1Q15404 277 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR8G1Q15617 311 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 C22orf42Q6IC83 251 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 RPL22L1Q6P5R6 122 aaKnown RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ATRAIDQ6UW56 229 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ACOT7LQ6ZUV0 252 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM179BQ7Z7N9 219 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF546Q86UE3 836 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 BATF2Q8N1L9 274 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ARRDC1Q8N5I2 433 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM86BQ8N661 226 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 UBAC2Q8NBM4 344 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 SDR9C7Q8NEX9 313 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR10A7Q8NGE5 316 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR56B2PQ8NGI1 322 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR10J5Q8NHC4 309 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 C11orf45Q8TAV5 145 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM234Q8WY98 164 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ST8SIA1Q92185 356 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 C11orf52Q96A22 123 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 MRPL53Q96EL3 112 aaKnown RBP4.16□□□□□ -1.74
SF3B3-214ENST00000572365 MS4A4EQ96PG1 132 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 OR52E6Q96RD3 313 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 SDF2Q99470 211 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 ARHGDIGQ99819 225 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 PBDC1Q9BVG4 233 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 SIRT7Q9NRC8 400 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 INPP5EQ9NRR6 644 aa4.16□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM106BQ9NUM4 274 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms