RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 LOC102724200A0A096LPH7 203 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-206ENST00000572083 TRBV9A0A0B4J1U6 114 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 ATP5HO75947 161 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 CBX3Q13185 183 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 TMEM177Q53S58 311 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 TMEM61Q8N0U2 210 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 ZNF555Q8NEP9 628 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 OR52B4Q8NGK2 314 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 ACOT12Q8WYK0 555 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 THRSPQ92748 146 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 KCTD12Q96CX2 325 aaKnown RBP14.85□□□□□ -0.03
CCDC40-206ENST00000572083 C5orf30Q96GV9 206 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 C12orf4Q9NQ89 552 aa14.85□□□□□ -0.03
CCDC40-206ENST00000572083 QRFPP83859 136 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 PRSS8Q16651 343 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 RBM48Q5RL73 367 aaKnown RBP14.84□□□□□ -0.03
CCDC40-206ENST00000572083 C1orf100Q5SVJ3 147 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 GLT8D1Q68CQ7 371 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 LYG2Q86SG7 212 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 LRRTM1Q86UE6 522 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 LPAR5Q9H1C0 372 aa14.84□□□□□ -0.03
CCDC40-206ENST00000572083 OR2J3O76001 311 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 OR2C1O95371 312 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 CD3GP09693 182 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 SRMP19623 302 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 TNFRSF9Q07011 255 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 ST3GAL4Q11206 333 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 RTL8BQ17RB0 113 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 C15orf32Q32M92 178 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 DMRT1Q9Y5R6 373 aa14.83□□□□□ -0.04
CCDC40-206ENST00000572083 KIAA1109Q2LD37 5005 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 RYR1P21817 5038 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 BET1O15155 118 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 SCAF4O95104 1147 aaKnown RBP14.82□□□□□ -0.04
CCDC40-206ENST00000572083 CBLN1P23435 193 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 UBE2KP61086 200 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 VMA21Q3ZAQ7 101 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 C10orf55Q5SWW7 151 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 NECAP1Q8NC96 275 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 SMPD3Q9NY59 655 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-206ENST00000572083 MLXQ9UH92 298 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 KLK5Q9Y337 293 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-206ENST00000572083 DNAH6Q9C0G6 4158 aa14.82□□□□□ -0.04
CCDC40-206ENST00000572083 TRDCB7Z8K6 153 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 LGALS9O00182 355 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 MYL12BO14950 172 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 GGCTO75223 188 aaKnown RBP14.81□□□□□ -0.04
CCDC40-206ENST00000572083 NDUFB8O95169 186 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 CRYZL1O95825 349 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 BPNT1O95861 308 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 CD1AP06126 327 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 TAGLNQ01995 201 aaKnown RBP14.81□□□□□ -0.04
CCDC40-206ENST00000572083 ACSM3Q53FZ2 586 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 TTC23Q5W5X9 447 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 ZNF57Q68EA5 555 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-206ENST00000572083 C19orf35Q6ZS72 473 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 CEACAM19Q7Z692 300 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 TEX45Q8NA69 505 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 ARHGAP5-AS1Q96IT6 56 aa14.81□□□□□ -0.04
CCDC40-206ENST00000572083 CMSS1Q9BQ75 279 aaKnown RBP14.81□□□□□ -0.04
CCDC40-206ENST00000572083 ZNF430Q9H8G1 570 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-206ENST00000572083 EFCAB10A6NFE3 127 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 FOXI3A8MTJ6 420 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-206ENST00000572083 IGHV3-23P01764 117 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 WNT4P56705 351 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 P2RY14Q15391 338 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 DEFB135Q30KP9 77 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 TM4SF20Q53R12 229 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 URM1Q9BTM9 101 aaKnown RBP14.8□□□□□ -0.04
CCDC40-206ENST00000572083 HSF4Q9ULV5 492 aa14.8□□□□□ -0.04
CCDC40-206ENST00000572083 TMEM213A2RRL7 107 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 SPRY2O43597 315 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 BMI1P35226 326 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 TMEM50BP56557 158 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 IGSF11Q5DX21 431 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 BTNL8Q6UX41 500 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 WFDC3Q8IUB2 231 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 FAM89BQ8N5H3 189 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 TTC9CQ8N5M4 171 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 OR6M1Q8NGM8 313 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 OR4A4PQ8NGN8 299 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 PHYHIPQ92561 330 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 SPIN2AQ99865 258 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 SPIN2BQ9BPZ2 258 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 PECRQ9BY49 303 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 S4R3C0 116 aa14.79□□□□□ -0.04
CCDC40-206ENST00000572083 ZNF320A2RRD8 509 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 FABP7O15540 132 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 SAA1P0DJI8 122 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-206ENST00000572083 RRASP10301 218 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 SERPINB10P48595 397 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 UXS1Q8NBZ7 420 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 CYGBQ8WWM9 190 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 CCDC140Q96MF4 163 aa14.78□□□□□ -0.04
CCDC40-206ENST00000572083 HMX3A6NHT5 357 aa14.77□□□□□ -0.05
CCDC40-206ENST00000572083 LINC00473A8K010 186 aa14.77□□□□□ -0.05
CCDC40-206ENST00000572083 ACTL6BO94805 426 aa14.77□□□□□ -0.05
CCDC40-206ENST00000572083 ARL3P36405 182 aa14.77□□□□□ -0.05
CCDC40-206ENST00000572083 ANKRD55Q3KP44 614 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms