RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 KBTBD11O94819 623 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 SOX8P57073 446 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 MIC13Q5XKP0 118 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 SGMS2Q8NHU3 365 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 TMEM18Q96B42 140 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 QTRT1Q9BXR0 403 aaKnown RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 SPTBN1Q01082 2364 aaKnown RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 EXPH5Q8NEV8 1989 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 A0A1B0GW64 132 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 LRRC30A6NM36 301 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 RPL29P47914 159 aaKnown RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 PKIAP61925 76 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 DPPA3Q6W0C5 159 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 WDR86Q86TI4 376 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 F6UZH7 168 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 GATCO43716 136 aaKnown RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 Q6ZSR3 168 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 OR8G5Q8NG78 346 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 KLF14Q8TD94 323 aaPredicted RBP12.88□□□□□ -0.35
USP43-202ENST00000570475 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
USP43-202ENST00000570475 C1QTNF9P0C862 333 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 NDUFB7P17568 137 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 GNG10P50151 68 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 TCL1AP56279 114 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 FAM201AQ5SY85 155 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 MARCH11A6NNE9 402 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 SPRY3O43610 288 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 AMBPP02760 352 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 GZMHP20718 246 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 COL8A2P25067 703 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 ZNF295-AS1Q8N0V1 137 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 IMMP2LQ96T52 175 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 CEACAM1P13688 526 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 Q6P435 159 aa12.87□□□□□ -0.35
USP43-202ENST00000570475 ZNF497Q6ZNH5 498 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 Q8IYB0 196 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 ZNF645Q8N7E2 425 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 PSMG3Q9BT73 122 aaPredicted RBP12.86□□□□□ -0.35
USP43-202ENST00000570475 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 SPTAN1Q13813 2472 aaKnown RBP12.86□□□□□ -0.35
USP43-202ENST00000570475 HRASP01112 189 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 MBP02144 154 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 CYC1P08574 325 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
USP43-202ENST00000570475 CD1BP29016 333 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 CTDSP1Q9GZU7 261 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 PLEKHA3Q9HB20 300 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 CBLN4Q9NTU7 201 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
USP43-202ENST00000570475 ABCA4P78363 2273 aa12.86□□□□□ -0.35
USP43-202ENST00000570475 B4E171 279 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 TSPAN7P41732 249 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 MBD3L1Q8WWY6 194 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 FER1L6-AS2Q96M78 137 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 PKIBQ9C010 78 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 PRDM13Q9H4Q3 707 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 INTS1Q8N201 2190 aaKnown RBP12.85□□□□□ -0.35
USP43-202ENST00000570475 SMPD2O60906 423 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 ZNRF1Q8ND25 227 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 MS4A10Q96PG2 267 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
USP43-202ENST00000570475 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 OOEPA6NGQ2 149 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 SLC17A3O00476 420 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 HOXA6P31267 233 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 ZNF83P51522 516 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 HTD2P86397 168 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
USP43-202ENST00000570475 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
USP43-202ENST00000570475 P2RX4Q99571 388 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
USP43-202ENST00000570475 GNB2P62879 340 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 S1PR3Q99500 378 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 IGKV3D-15A0A087WSY6 115 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 LINC00473A8K010 186 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 ARL14EPLP0DKL9 152 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
USP43-202ENST00000570475 ZFHX2Q9C0A1 2572 aaPredicted RBP12.84□□□□□ -0.35
USP43-202ENST00000570475 OR7C2O60412 319 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms