RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
GCOM1-213ENST00000569945 KLHL13Q9P2N7 655 aa11.89□□□□□ -0.51
GCOM1-213ENST00000569945 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
GCOM1-213ENST00000569945 NPIPA5E9PKD4 350 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 PPYP01298 95 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 GP1BBP13224 206 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 FAHP16930 419 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 DAP3P51398 398 aaKnown RBP11.88□□□□□ -0.51
GCOM1-213ENST00000569945 HERV-K104P61576 105 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.88□□□□□ -0.51
GCOM1-213ENST00000569945 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 MYPOPQ86VE0 399 aaPredicted RBP11.88□□□□□ -0.51
GCOM1-213ENST00000569945 OR2M7Q8NG81 312 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 LYZL4Q96KX0 146 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 SAMD10Q9BYL1 202 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
GCOM1-213ENST00000569945 MED29Q9NX70 200 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 NPIPA1Q9UND3 350 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 FAM166BA8MTA8 275 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 TMPRSS2O15393 492 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 PLPPR5Q32ZL2 321 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 RNFT1Q5M7Z0 435 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 TNFRSF14Q92956 283 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 CACNA1BQ00975 2339 aa11.88□□□□□ -0.51
GCOM1-213ENST00000569945 PSG1P11464 419 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 APOBEC3AP31941 199 aaPredicted RBP11.87□□□□□ -0.51
GCOM1-213ENST00000569945 MEOX1P50221 254 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 POU3F1Q03052 451 aaPredicted RBP11.87□□□□□ -0.51
GCOM1-213ENST00000569945 C17orf67Q0P5P2 114 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 ZADH2Q8N4Q0 377 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 SIGLECL1Q8N7X8 197 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 OR4F17Q8NGA8 305 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
GCOM1-213ENST00000569945 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
GCOM1-213ENST00000569945 NUDT14O95848 222 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 NRASP01111 189 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 KRASP01116 189 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 CELA3AP09093 270 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 CD46P15529 392 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 PGCP20142 388 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 CBLN1P23435 193 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 VAMP3Q15836 100 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 PCSK4Q6UW60 755 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 PNKDQ8N490 385 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 FADS6Q8N9I5 356 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
GCOM1-213ENST00000569945 RNF212BA8MTL3 300 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 ZNF253O75346 499 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 CLDN18P56856 261 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 OR5P3Q8WZ94 311 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 IL19Q9UHD0 177 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
GCOM1-213ENST00000569945 IGHG1P01857 330 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 LY6DQ14210 128 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 Q6ZS92 163 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 MUC15Q8N387 334 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
GCOM1-213ENST00000569945 PIGTQ969N2 578 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
GCOM1-213ENST00000569945 MRPL18Q9H0U6 180 aaKnown RBP11.86□□□□□ -0.51
GCOM1-213ENST00000569945 IGLV3-32A0A0A0MS00 114 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 BMI1P35226 326 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 PSG4Q00888 419 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 LRRC10Q5BKY1 277 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 TAAR6Q96RI8 345 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 GPHA2Q96T91 129 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 TRAV17A0A0B4J275 112 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 FAM180AQ6UWF9 173 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 YRDCQ86U90 279 aaKnown RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 ZNF114Q8NC26 417 aa11.85□□□□□ -0.51
GCOM1-213ENST00000569945 MRPL13Q9BYD1 178 aaKnown RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 ZNF430Q9H8G1 570 aaPredicted RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 KLF13Q9Y2Y9 288 aaPredicted RBP11.85□□□□□ -0.51
GCOM1-213ENST00000569945 ZNF407Q9C0G0 2248 aa11.84□□□□□ -0.51
GCOM1-213ENST00000569945 CTXND1A0A1B0GTU2 59 aa11.84□□□□□ -0.51
GCOM1-213ENST00000569945 LOC102725191A0A1B0GVB3 256 aa11.84□□□□□ -0.51
GCOM1-213ENST00000569945 K7ERU9 68 aa11.84□□□□□ -0.51
GCOM1-213ENST00000569945 RER1O15258 196 aa11.84□□□□□ -0.51
GCOM1-213ENST00000569945 RBFOX2O43251 390 aaKnown RBP eCLIP11.84□□□□□ -0.51
GCOM1-213ENST00000569945 EFNA2O43921 213 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms