RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 H7C2Y5 167 aa5□□□□□ -1.61
CYLD-216ENST00000569891 CHST1O43916 411 aa5□□□□□ -1.61
CYLD-216ENST00000569891 MPDU1O75352 247 aa5□□□□□ -1.61
CYLD-216ENST00000569891 IGHV3-43DP0DP04 118 aa5□□□□□ -1.61
CYLD-216ENST00000569891 LGALS7P47929 136 aa5□□□□□ -1.61
CYLD-216ENST00000569891 PPT1P50897 306 aa5□□□□□ -1.61
CYLD-216ENST00000569891 POLR2GP62487 172 aaKnown RBP eCLIP5□□□□□ -1.61
CYLD-216ENST00000569891 TMEM252Q8N6L7 170 aa5□□□□□ -1.61
CYLD-216ENST00000569891 TMEM147Q9BVK8 224 aa5□□□□□ -1.61
CYLD-216ENST00000569891 LIME1Q9H400 295 aa5□□□□□ -1.61
CYLD-216ENST00000569891 PARP11Q9NR21 331 aa5□□□□□ -1.61
CYLD-216ENST00000569891 G3V3Q6 166 aa5□□□□□ -1.61
CYLD-216ENST00000569891 SHOXO15266 292 aa5□□□□□ -1.61
CYLD-216ENST00000569891 MT-CO2P00403 227 aa5□□□□□ -1.61
CYLD-216ENST00000569891 DUTP33316 252 aaKnown RBP5□□□□□ -1.61
CYLD-216ENST00000569891 ERHP84090 104 aaKnown RBP5□□□□□ -1.61
CYLD-216ENST00000569891 SERF2P84101 59 aa5□□□□□ -1.61
CYLD-216ENST00000569891 TNFRSF9Q07011 255 aa5□□□□□ -1.61
CYLD-216ENST00000569891 S100A7AQ86SG5 101 aa5□□□□□ -1.61
CYLD-216ENST00000569891 TGIF2LYQ8IUE0 185 aa5□□□□□ -1.61
CYLD-216ENST00000569891 TGIF2LXQ8IUE1 241 aa5□□□□□ -1.61
CYLD-216ENST00000569891 FAM216BQ8N7L0 139 aa5□□□□□ -1.61
CYLD-216ENST00000569891 MMP26Q9NRE1 261 aa5□□□□□ -1.61
CYLD-216ENST00000569891 MARCH11A6NNE9 402 aa5□□□□□ -1.61
CYLD-216ENST00000569891 DVL1O14640 695 aa5□□□□□ -1.61
CYLD-216ENST00000569891 ENSAO43768 121 aaKnown RBP5□□□□□ -1.61
CYLD-216ENST00000569891 SULT1A2P50226 295 aa5□□□□□ -1.61
CYLD-216ENST00000569891 PDLIM4P50479 330 aa5□□□□□ -1.61
CYLD-216ENST00000569891 SLC25A48Q6ZT89 311 aaKnown RBP5□□□□□ -1.61
CYLD-216ENST00000569891 DTX2Q86UW9 622 aa5□□□□□ -1.61
CYLD-216ENST00000569891 TPRX1Q8N7U7 411 aa5□□□□□ -1.61
CYLD-216ENST00000569891 DTD1Q8TEA8 209 aa5□□□□□ -1.61
CYLD-216ENST00000569891 NARS2Q96I59 477 aaKnown RBP5□□□□□ -1.61
CYLD-216ENST00000569891 RNF5Q99942 180 aa5□□□□□ -1.61
CYLD-216ENST00000569891 PARD6GQ9BYG4 376 aaPredicted RBP5□□□□□ -1.61
CYLD-216ENST00000569891 COMMD5Q9GZQ3 224 aa5□□□□□ -1.61
CYLD-216ENST00000569891 WASHC3Q9Y3C0 194 aa5□□□□□ -1.61
CYLD-216ENST00000569891 DEFB108AA8MXU0 73 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 OOSP1A8MZH6 123 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 M0R1W7 72 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 ZNF205O95201 554 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 USF1P22415 310 aaPredicted RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 S100A7P31151 101 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 SNCAP37840 140 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 EFNA4P52798 201 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 LGALS4P56470 323 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 DSCR9P59020 149 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 EIF4E3Q8N5X7 224 aaKnown RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 FLYWCH2Q96CP2 140 aaKnown RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 RBMXL1Q96E39 390 aaKnown RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 GINS3Q9BRX5 216 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PSMG3Q9BT73 122 aaPredicted RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 CLEC7AQ9BXN2 247 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PRR13Q9NZ81 148 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 TIMM9Q9Y5J7 89 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 IFNA10P01566 189 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 NCR3LG1Q68D85 454 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 OR4C13Q8NGP0 309 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 OR2G3Q8NGZ4 309 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 TMED6Q8WW62 240 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 DCTN5Q9BTE1 182 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 UBTD1Q9HAC8 227 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PLEKHA3Q9HB20 300 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 HSPB7Q9UBY9 170 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PPIAL4CA0A0B4J2A2 164 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 FOXH1O75593 365 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PPIAL4GP0DN37 164 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 GNLYP22749 145 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 SPANXN5Q5MJ07 72 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 DMRTC2Q8IXT2 367 aaPredicted RBP4.99□□□□□ -1.61
CYLD-216ENST00000569891 SLC7A5P1Q8MH63 180 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 OR5C1Q8NGR4 320 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 OR5B3Q8NH48 314 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 UBALD1Q8TB05 177 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 RPEQ96AT9 228 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 SMIM3Q9BZL3 60 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 UQCC1Q9NVA1 299 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 METRNQ9UJH8 293 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 ZNF257Q9Y2Q1 563 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 PTPRQQ9UMZ3 2332 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 H0YIZ8 118 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 NDUFS8O00217 210 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 NMBP08949 121 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 SLC38A11Q08AI6 406 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 POU2AF1Q16633 256 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 ETFRF1Q6IPR1 90 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 KIR3DL3Q8N743 410 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 LHX4Q969G2 390 aa4.99□□□□□ -1.61
CYLD-216ENST00000569891 FAM24AA6NFZ4 105 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 CRYZL1O95825 349 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 MAS1LP35410 378 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 G6PCP35575 357 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 GNG10P50151 68 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 HSPE1P61604 102 aaKnown RBP4.98□□□□□ -1.61
CYLD-216ENST00000569891 RPS16P62249 146 aaKnown RBP4.98□□□□□ -1.61
CYLD-216ENST00000569891 ZNF616Q08AN1 781 aa4.98□□□□□ -1.61
CYLD-216ENST00000569891 C17orf58Q2M2W7 97 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms