RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HBG1P69891 147 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 HBG2P69892 147 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 DEFA5Q01523 94 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 TLE4Q04727 773 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 BSPH1Q075Z2 132 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 KLRB1Q12918 225 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 EDDM3AQ14507 147 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 CLINT1Q14677 625 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 EFNB3Q15768 340 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 GUCA2BQ16661 112 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 IZUMO4Q1ZYL8 232 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 VWC2Q2TAL6 325 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 CT45A1Q5HYN5 189 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 H2BFWTQ7Z2G1 175 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF808Q8N4W9 903 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF525Q8N782 197 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 TPRX1Q8N7U7 411 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 C8orf31Q8N9H6 132 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 BOLLQ8N9W6 283 aaKnown RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 HSD17B11Q8NBQ5 300 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ST6GALNAC3Q8NDV1 305 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 CT45A3Q8NHU0 189 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 SCGB1C1Q8TD33 95 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 C17orf50Q8WW18 174 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 TCTEX1D2Q8WW35 142 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 RNASE6Q93091 150 aaKnown RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 PINX1Q96BK5 328 aaKnown RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 NARS2Q96I59 477 aaKnown RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 OR4C12Q96R67 309 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF251Q9BRH9 671 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 PBDC1Q9BVG4 233 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 GGACTQ9BVM4 153 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 NKX6-2Q9C056 277 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 MS4A7Q9GZW8 240 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
SF3B3-213ENST00000569687 KCNJ16Q9NPI9 418 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 IDI2-AS1Q9NZ38 188 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 GNG12Q9UBI6 72 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 PRELID3BQ9Y3B1 194 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 FAM96BQ9Y3D0 163 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 PRR14LQ5THK1 2151 aa4.44□□□□□ -1.7
SF3B3-213ENST00000569687 HEATR1Q9H583 2144 aaKnown RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 PPIAL4EA0A075B759 164 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 IGHV3-43A0A0B4J1X8 118 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 RBFOX3A6NFN3 312 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 DEFB108AA8MXU0 73 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SHISA9B4DS77 424 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 B9A039 149 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 C22orf46C9J442 243 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 E7EQL1 145 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 PPIAL4DF5H284 164 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SOX15O60248 233 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 CYB5R3P00387 301 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 HBE1P02100 147 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SFTA3P0C7M3 94 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 PPIAL4FP0DN26 164 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 IGHV3-43DP0DP04 118 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SFTPCP11686 197 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 NQO2P16083 231 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 PAX6P26367 422 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 APOBEC3AP31941 199 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 CA7P43166 264 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 THBS3P49746 956 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 FHITP49789 147 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 RAB2AP61019 212 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 CCL20P78556 96 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 MRPS11P82912 194 aaKnown RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 AKR1C1Q04828 323 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF816Q0VGE8 651 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SPANXN5Q5MJ07 72 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 FAM201AQ5SY85 155 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 AKR1C8PQ5T2L2 129 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM182Q6ZP80 229 aaPredicted RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 TCF23Q7RTU1 214 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF429Q86V71 674 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 Q8N1Y9 231 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM217Q8N7C4 229 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 OR10G4Q8NGN3 311 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 FAM213BQ8TBF2 198 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF596Q8TC21 504 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 WFDC12Q8WWY7 111 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 TAF15Q92804 592 aaKnown RBP eCLIP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 R3HDM4Q96D70 268 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 RBMXL1Q96E39 390 aaKnown RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 S1PR3Q99500 378 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 CCL13Q99616 98 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 ABHD14AQ9BUJ0 271 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 WDR61Q9GZS3 305 aaKnown RBP4.43□□□□□ -1.7
SF3B3-213ENST00000569687 SLC35B3Q9H1N7 401 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 TUBA4BQ9H853 241 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 KIAA1456Q9P272 454 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 KAAG1Q9UBP8 84 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 NDRG3Q9UGV2 375 aa4.43□□□□□ -1.7
SF3B3-213ENST00000569687 RPUSD1Q9UJJ7 312 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms