RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SCGNO76038 276 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 HLA-DQB1P01920 261 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 CD36P16671 472 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 NFYAP23511 347 aaPredicted RBP6.03□□□□□ -1.44
CDH3-209ENST00000569080 TGFBR1P36897 503 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 LGALS7P47929 136 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 SLURP1P55000 103 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 RPS16P62249 146 aaKnown RBP6.03□□□□□ -1.44
CDH3-209ENST00000569080 MXD1Q05195 221 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 FXYD3Q14802 87 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 UNQ5815/PRO19632Q6UWF5 114 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 OVCH2Q7RTZ1 564 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 ZNF645Q8N7E2 425 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 BVESQ8NE79 360 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 DLX4Q92988 240 aaPredicted RBP6.03□□□□□ -1.44
CDH3-209ENST00000569080 RHOVQ96L33 236 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 PRR25Q96S07 402 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 B9D2Q9BPU9 175 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 GINS4Q9BRT9 223 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 ANXA10Q9UJ72 324 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 ETV7Q9Y603 341 aa6.03□□□□□ -1.44
CDH3-209ENST00000569080 TRIM64CA6NLI5 447 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 LINC01619G3V211 115 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 H3BUA1 57 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 BRI3O95415 125 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 CRYZL1O95825 349 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 IGHV3-11P01762 117 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 SAA1P0DJI8 122 aaPredicted RBP6.02□□□□□ -1.45
CDH3-209ENST00000569080 TALDO1P37837 337 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 BRWD1-AS2P59051 145 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 TPPP2P59282 170 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 GNG2P59768 71 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 UBE2KP61086 200 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 RPL30P62888 115 aaKnown RBP6.02□□□□□ -1.45
CDH3-209ENST00000569080 PITPNAQ00169 270 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 TAGLNQ01995 201 aaKnown RBP6.02□□□□□ -1.45
CDH3-209ENST00000569080 TMEM267Q0VDI3 215 aaPredicted RBP6.02□□□□□ -1.45
CDH3-209ENST00000569080 RTL8BQ17RB0 113 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 CNIH2Q6PI25 160 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 IDO2Q6ZQW0 420 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 GVQW1Q8N7I0 195 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 POC5Q8NA72 575 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 SNAPC3Q92966 411 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 YIPF6Q96EC8 236 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 ADTRPQ96IZ2 230 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 ST6GALNAC5Q9BVH7 336 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 SLA2Q9H6Q3 261 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 RBMX2Q9Y388 322 aaKnown RBP6.02□□□□□ -1.45
CDH3-209ENST00000569080 OR2W1Q9Y3N9 320 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 RYR2Q92736 4967 aa6.02□□□□□ -1.45
CDH3-209ENST00000569080 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 A0A0A6YYH2 397 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 A6NJ64 397 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 OVOL1O14753 267 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 SHOXO15266 292 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 TMEM127O75204 238 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 CTXN2P0C2S0 81 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 RRASP10301 218 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 PTHLHP12272 177 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 ECI1P42126 302 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 INSL3P51460 131 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 DEFA5Q01523 94 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 DYRK1AQ13627 763 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 PRSS8Q16651 343 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 C10orf55Q5SWW7 151 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 IDNKQ5T6J7 187 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 ACSM6Q6P461 480 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 KCTD9Q7L273 389 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 TEX45Q8NA69 505 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 ADAD2Q8NCV1 583 aaKnown RBP6.01□□□□□ -1.45
CDH3-209ENST00000569080 OSR1Q8TAX0 266 aaPredicted RBP6.01□□□□□ -1.45
CDH3-209ENST00000569080 MS4A10Q96PG2 267 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 AUNIPQ9H7T9 357 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 ZNF430Q9H8G1 570 aaPredicted RBP6.01□□□□□ -1.45
CDH3-209ENST00000569080 ZMAT5Q9UDW3 170 aaKnown RBP6.01□□□□□ -1.45
CDH3-209ENST00000569080 ANAPC10Q9UM13 185 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 SPATA2Q9UM82 520 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 ZNF256Q9Y2P7 627 aaPredicted RBP6.01□□□□□ -1.45
CDH3-209ENST00000569080 SORL1Q92673 2214 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
CDH3-209ENST00000569080 TRAV18A0A075B6X5 111 aa6□□□□□ -1.45
CDH3-209ENST00000569080 A0A1B0GW64 132 aa6□□□□□ -1.45
CDH3-209ENST00000569080 J3QRK9 145 aa6□□□□□ -1.45
CDH3-209ENST00000569080 FCGR3BO75015 233 aa6□□□□□ -1.45
CDH3-209ENST00000569080 TRBV12-3P01733 135 aa6□□□□□ -1.45
CDH3-209ENST00000569080 TRGV3P03979 118 aa6□□□□□ -1.45
CDH3-209ENST00000569080 HSPB1P04792 205 aaKnown RBP6□□□□□ -1.45
CDH3-209ENST00000569080 ZNF45Q02386 682 aa6□□□□□ -1.45
CDH3-209ENST00000569080 CD69Q07108 199 aa6□□□□□ -1.45
CDH3-209ENST00000569080 CBX3Q13185 183 aa6□□□□□ -1.45
CDH3-209ENST00000569080 DCTN2Q13561 401 aaKnown RBP6□□□□□ -1.45
CDH3-209ENST00000569080 CDK10Q15131 360 aa6□□□□□ -1.45
CDH3-209ENST00000569080 MSMO1Q15800 293 aa6□□□□□ -1.45
CDH3-209ENST00000569080 VMA21Q3ZAQ7 101 aa6□□□□□ -1.45
CDH3-209ENST00000569080 DEFB121Q5J5C9 76 aa6□□□□□ -1.45
CDH3-209ENST00000569080 OR2B11Q5JQS5 317 aa6□□□□□ -1.45
CDH3-209ENST00000569080 VAX1Q5SQQ9 334 aa6□□□□□ -1.45
CDH3-209ENST00000569080 ZNF429Q86V71 674 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms