RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 OR4P4Q8NGL7 312 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 PPP1R1CQ8WVI7 109 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 OPA3Q9H6K4 179 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 SMCO4Q9NRQ5 59 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 IKZF2Q9UKS7 526 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 DHDHQ9UQ10 334 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 TRAV8-7A0A075B6U6 113 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 PSPNO60542 156 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 ZNF728P0DKX0 622 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 ARHGDIBP52566 201 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 FOXE3Q13461 319 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 FAAP20Q6NZ36 180 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 FOXRED2Q8IWF2 684 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 CD177Q8N6Q3 437 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 C5orf56Q8N8D9 126 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 OR1S2Q8NGQ3 325 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 AQP3Q92482 292 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 SMIM8Q96KF7 97 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 ATG5Q9H1Y0 275 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 CHMP1AQ9HD42 196 aaPredicted RBP8.66□□□□□ -1.02
CDH3-208ENST00000569036 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
CDH3-208ENST00000569036 C9orf170A2RU37 121 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 LINC01548A6NM66 108 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 C12orf77C9JDV5 145 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 MFNGO00587 321 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 UBE2CO00762 179 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 BPNT1O95861 308 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 IGHG2P01859 326 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 MAS1P04201 325 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 GAPDHP04406 335 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 FCER2P06734 321 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 CDKN2AP42771 156 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 SOX2P48431 317 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 CAV2P51636 162 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 AKR1D1P51857 326 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 RIDAP52758 137 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 ZNF616Q08AN1 781 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 PEA15Q15121 130 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 TMEM244Q5VVB8 128 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 PRSS54Q6PEW0 395 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 DNM1P34Q6PK57 102 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 NUDCD2Q8WVJ2 157 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 SPTSSAQ969W0 71 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 FAM46BQ96A09 425 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 MICU1Q9BPX6 476 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 RTL8AQ9BWD3 113 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 PAPOLGQ9BWT3 736 aaKnown RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 CLEC7AQ9BXN2 247 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
CDH3-208ENST00000569036 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 UQCC1Q9NVA1 299 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 DPM3Q9P2X0 92 aa8.65□□□□□ -1.02
CDH3-208ENST00000569036 TMEM210A6NLX4 147 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 GPR31O00270 319 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 HSPA12AO43301 675 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 RPP14O95059 124 aaKnown RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 ELANEP08246 267 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 SLC2A1P11166 492 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 S100PP25815 95 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 HSD11B1P28845 292 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 OTX1P32242 354 aaPredicted RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 KIR3DL2P43630 455 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR20EP86478 221 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR20CP86479 221 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR20DP86480 221 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR20BP86481 221 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRR20AP86496 221 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 FAM3AP98173 230 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 ARL6IP1Q15041 203 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
CDH3-208ENST00000569036 TAF13Q15543 124 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 DNLZQ5SXM8 178 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 TMED4Q7Z7H5 227 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 CATSPERDQ86XM0 798 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 ANGPTL5Q86XS5 388 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 PRSS35Q8N3Z0 413 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 OR51L1Q8NGJ5 315 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 OR6N2Q8NGY6 317 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 TSSK2Q96PF2 358 aa8.64□□□□□ -1.03
CDH3-208ENST00000569036 NRIP2Q9BQI9 281 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms