RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GFI1Q99684 422 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 SLC35D1Q9NTN3 355 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 RBBP9O75884 186 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 ATP6V1G2O95670 118 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 GLAP06280 429 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 HSPA13P48723 471 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
USB1-214ENST00000568848 HLA-DRB3P79483 266 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 C10orf55Q5SWW7 151 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 MGLLQ99685 303 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 AKIP1Q9NQ31 210 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 GHRLQ9UBU3 117 aa11.16□□□□□ -0.62
USB1-214ENST00000568848 ZNF230Q9UIE0 474 aaPredicted RBP11.16□□□□□ -0.62
USB1-214ENST00000568848 AK6Q9Y3D8 172 aaKnown RBP11.16□□□□□ -0.62
USB1-214ENST00000568848 A0A0G2JLM5 398 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 MSGN1A6NI15 193 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 CD37P11049 281 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 RHOGP84095 191 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 MLLT11Q13015 90 aaPredicted RBP11.15□□□□□ -0.62
USB1-214ENST00000568848 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
USB1-214ENST00000568848 P2RY14Q15391 338 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 ADAD2Q8NCV1 583 aaKnown RBP11.15□□□□□ -0.62
USB1-214ENST00000568848 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 KCNG3Q8TAE7 436 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 PHB2Q99623 299 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 TMEM59Q9BXS4 323 aa11.15□□□□□ -0.62
USB1-214ENST00000568848 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 H3BUA1 57 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 SPDEFO95238 335 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 UBBP0CG47 229 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 QRFPP83859 136 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 FABP5Q01469 135 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 RDH8Q9NYR8 311 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
USB1-214ENST00000568848 TMEM14DPA8MWL7 114 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 OR2A4O95047 310 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 APOA2P02652 100 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 LGALS7P47929 136 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 SSX1Q16384 188 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 TNXAQ16473 311 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 RNF5Q99942 180 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 PLGRKTQ9HBL7 147 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 SDHAF2Q9NX18 166 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 SLC2A8Q9NY64 477 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 SIGLEC8Q9NYZ4 499 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 DMRT1Q9Y5R6 373 aa11.13□□□□□ -0.63
USB1-214ENST00000568848 C2orf70A6NJV1 201 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 SLC17A2O00624 439 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 OR2J3O76001 311 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
USB1-214ENST00000568848 OR2C1O95371 312 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 BPNT1O95861 308 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 FOLR2P14207 255 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 ZBTB25P24278 435 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 CALRP27797 417 aaKnown RBP11.12□□□□□ -0.63
USB1-214ENST00000568848 CLDN12P56749 244 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 TRAM1Q15629 374 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 OR6M1Q8NGM8 313 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 EDARADDQ8WWZ3 215 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 TM2D1Q9BX74 207 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 LPAR5Q9H1C0 372 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 Q9N2K0 584 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 ACOT13Q9NPJ3 140 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 ZC4H2Q9NQZ6 224 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 LRRC42Q9Y546 428 aa11.12□□□□□ -0.63
USB1-214ENST00000568848 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 A0A0B4J203 849 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 HMX3A6NHT5 357 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 SHOXO15266 292 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 ARL6IP5O75915 188 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 AADACP22760 399 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 PSMA1P25786 263 aaKnown RBP11.11□□□□□ -0.63
USB1-214ENST00000568848 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
USB1-214ENST00000568848 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 ZNF367Q7RTV3 350 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 ACOT12Q8WYK0 555 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 DDB2Q92466 427 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 ARHGAP5-AS1Q96IT6 56 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 PEMTQ9UBM1 199 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
USB1-214ENST00000568848 J3QRK9 145 aa11.1□□□□□ -0.63
USB1-214ENST00000568848 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
USB1-214ENST00000568848 BET1O15155 118 aa11.1□□□□□ -0.63
USB1-214ENST00000568848 MPPED1O15442 326 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms