RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	RAB7A	P51149	207 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	LUM	P51884	338 aa	Predicted RBP	6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	DEFA1	P59665	94 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	DEFA3	P59666	94 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	TAGLN	Q01995	201 aa	Known RBP	6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	AANAT	Q16613	207 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	MRGPRG-AS1	Q2M3A8	158 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	TMEM30B	Q3MIR4	351 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	ABCA11P	Q4W5N1	156 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	AADACL3	Q5VUY0	350 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	PYHIN1	Q6K0P9	492 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	DHRS11	Q6UWP2	260 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	LIAT1	Q6ZQX7	453 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	ZNF818P	Q6ZRF7	136 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	THNSL2	Q86YJ6	484 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	OR8H3	Q8N146	312 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566		Q8N9W7	124 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	MINDY2	Q8NBR6	621 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	GIMAP1	Q8WWP7	306 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	FCAMR	Q8WWV6	532 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	DDB2	Q92466	427 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	TRIM63	Q969Q1	353 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	RBM14	Q96PK6	669 aa	Known RBP	6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	HSPB9	Q9BQS6	159 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	THAP7	Q9BT49	309 aa	Predicted RBP	6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	SLC5A7	Q9GZV3	580 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	FBXL15	Q9H469	300 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	RAB9B	Q9NP90	201 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	TAS2R8	Q9NYW2	309 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	GAB2	Q9UQC2	676 aa		6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	RBM7	Q9Y580	266 aa	Known RBP	6.6	□□□□□ -1.35
TSC2-223	ENST00000568566	TENM2	Q9NT68	2774 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	CTDSPL	O15194	276 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	GSTZ1	O43708	216 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	OR2F2	O95006	317 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	RAB3D	O95716	219 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	IGLV2-23	P01705	113 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	CD74	P04233	296 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	CTXN2	P0C2S0	81 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	MYOD1	P15172	320 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	RPA2	P15927	270 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	IL3RA	P26951	378 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	HOXD3	P31249	432 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	BRS3	P32247	399 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	ACTB	P60709	375 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	PJVK	Q0ZLH3	352 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	KLF9	Q13886	244 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	ARSJ	Q5FYB0	599 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	C9orf152	Q5JTZ5	239 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	VKORC1L1	Q8N0U8	176 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566		Q8N2B8	174 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	C5orf56	Q8N8D9	126 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	TMEM229B	Q8NBD8	167 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	OR5AN1	Q8NGI8	311 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	OR4C16	Q8NGL9	310 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	WIPF2	Q8TF74	440 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	EDARADD	Q8WWZ3	215 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	MOB3A	Q96BX8	217 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	NOL4L	Q96MY1	436 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	CLCC1	Q96S66	551 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	PIPOX	Q9P0Z9	390 aa		6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	ZNF107	Q9UII5	783 aa	Predicted RBP	6.59	□□□□□ -1.35
TSC2-223	ENST00000568566	ANKRD20A5P	A0PJZ0	165 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	NCBP2L	A6PVI3	153 aa	Known RBP	6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	RAMP3	O60896	148 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	UPK1B	O75841	260 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	DIRAS3	O95661	229 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	MOS	P00540	346 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	PF4	P02776	101 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	TAS2R46	P59540	309 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	SSBP2	P81877	361 aa	Predicted RBP	6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	NDP	Q00604	133 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	IFITM3	Q01628	133 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	SSBP1	Q04837	148 aa	Known RBP	6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	PHLDA2	Q53GA4	152 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	STEAP1B	Q6NZ63	245 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	LCNL1	Q6ZST4	164 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	LHFPL1	Q86WI0	220 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	ZNF645	Q8N7E2	425 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	WFDC9	Q8NEX5	89 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	OR13C8	Q8NGS7	320 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	OR2T10	Q8NGZ9	312 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	S1PR3	Q99500	378 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	B9D2	Q9BPU9	175 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	HRASLS	Q9HDD0	168 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	SLC35D1	Q9NTN3	355 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	PRR13	Q9NZ81	148 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	FBXO7	Q9Y3I1	522 aa		6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.58	□□□□□ -1.36
TSC2-223	ENST00000568566	TRAV3	A0A0B4J244	114 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566		H7C2Y5	167 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	ARPC1B	O15143	372 aa	Known RBP	6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	FCGR3B	O75015	233 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	PGLYRP1	O75594	196 aa	Predicted RBP	6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	CRYGB	P07316	175 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	FAM106CP	P0CH98	169 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	EGR2	P11161	476 aa	Predicted RBP	6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	VDAC2	P45880	294 aa	Predicted RBP	6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	INPP1	P49441	399 aa		6.57	□□□□□ -1.36
TSC2-223	ENST00000568566	AP3S2	P59780	193 aa		6.57	□□□□□ -1.36

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