RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	IL15RA	Q13261	267 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	C1orf229	Q6ZS94	237 aa	Predicted RBP	12.52	□□□□□ -0.41
CSK-211	ENST00000568329	ZNF383	Q8NA42	475 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	OR5AN1	Q8NGI8	311 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	THAP6	Q8TBB0	222 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	RPE	Q96AT9	228 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	SLC35D1	Q9NTN3	355 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	COA4	Q9NYJ1	87 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	ZNRD1	Q9P1U0	126 aa		12.52	□□□□□ -0.41
CSK-211	ENST00000568329	TRAV20	A0A0B4J274	112 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	MARCH11	A6NNE9	402 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	FAM90A9P	A6NNJ1	464 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	HMSD	A8MTL9	139 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329		G3V3Q6	166 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	SMLR1	H3BR10	107 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	S1PR2	O95136	353 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	MPC2	O95563	127 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	HRAS	P01112	189 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	NQO2	P16083	231 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	PAX8	Q06710	450 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	SMCO1	Q147U7	214 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	MINOS1	Q5TGZ0	78 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	C11orf87	Q6NUJ2	197 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	PDPN	Q86YL7	162 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	MRPL20	Q9BYC9	149 aa	Known RBP	12.51	□□□□□ -0.41
CSK-211	ENST00000568329	DPM3	Q9P2X0	92 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	CACFD1	Q9UGQ2	172 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	MINOS1-NBL1	R4GNA1	71 aa		12.51	□□□□□ -0.41
CSK-211	ENST00000568329	OOSP1	A8MZH6	123 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329		H0YJW9	148 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	KRAS	P01116	189 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	RLN2	P04090	185 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	SLC25A4	P12235	298 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	HOXB4	P17483	251 aa	Predicted RBP	12.5	□□□□□ -0.41
CSK-211	ENST00000568329	UBE2E1	P51965	193 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	LRRC37A5P	Q49AS3	106 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	H2BFWT	Q7Z2G1	175 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	LINC01356	Q8N9X3	169 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	OSR1	Q8TAX0	266 aa	Predicted RBP	12.5	□□□□□ -0.41
CSK-211	ENST00000568329	R3HDM4	Q96D70	268 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	NABP2	Q9BQ15	211 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	WASHC3	Q9Y3C0	194 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	TBL2	Q9Y4P3	447 aa	Known RBP	12.5	□□□□□ -0.41
CSK-211	ENST00000568329	ARHGAP32	A7KAX9	2087 aa		12.5	□□□□□ -0.41
CSK-211	ENST00000568329	ST8SIA3	O43173	380 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	CRYZL1	O95825	349 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	IGKV1-5	P01602	117 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	LGALS4	P56470	323 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	LINC00205	P59089	165 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	POU2AF1	Q16633	256 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	TMEM249	Q2WGJ8	235 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	HCP5	Q6MZN7	132 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	CCDC144NL	Q6NUI1	221 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	TMEM65	Q6PI78	240 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	OR8H3	Q8N146	312 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	MAPK1IP1L	Q8NDC0	245 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	OR4D5	Q8NGN0	318 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	WDR89	Q96FK6	387 aa	Predicted RBP	12.49	□□□□□ -0.41
CSK-211	ENST00000568329	TBX15	Q96SF7	602 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	CR1	P17927	2039 aa		12.49	□□□□□ -0.41
CSK-211	ENST00000568329	FAM90A26	D6RGX4	464 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	RNASEK-C17orf49	H0YIS7	233 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	LY6L	H3BQJ8	138 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329		H7C2Y5	167 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329		P0C879	139 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	C4BPB	P20851	252 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	G6PC	P35575	357 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	NKX2-1	P43699	371 aa	Predicted RBP	12.48	□□□□□ -0.41
CSK-211	ENST00000568329	RAB32	Q13637	225 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329		Q5BKY6	102 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	TPTE2P1	Q5T6R2	138 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	PRSS54	Q6PEW0	395 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	DMBX1	Q8NFW5	382 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	OR4C13	Q8NGP0	309 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	OR1S1	Q8NH92	325 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	GPR146	Q96CH1	333 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	CACNG5	Q9UF02	275 aa		12.48	□□□□□ -0.41
CSK-211	ENST00000568329	FXYD6-FXYD2	A0A087WZ82	144 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	TRAV14DV4	A0A0A6YYC5	116 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	PITX3	O75364	302 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	IGHV4-31	P0DP07	118 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	REG1B	P48304	166 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	DLX1	P56177	255 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	S100A10	P60903	97 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	MIDN	Q504T8	468 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	TMEM177	Q53S58	311 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	OR11H4	Q8NGC9	324 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	LHX4	Q969G2	390 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	FLYWCH2	Q96CP2	140 aa	Known RBP	12.47	□□□□□ -0.41
CSK-211	ENST00000568329	POMT1	Q9Y6A1	747 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	IGHV1-3	A0A0C4DH29	117 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329		A0A0G2JRQ6	117 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329		J3QLI3	93 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	SCGB1D2	O95969	90 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	LYL1	P12980	280 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	PVALB	P20472	110 aa	Predicted RBP	12.47	□□□□□ -0.41
CSK-211	ENST00000568329	NKX2-5	P52952	324 aa	Predicted RBP	12.47	□□□□□ -0.41
CSK-211	ENST00000568329	ID3	Q02535	119 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	KLRD1	Q13241	179 aa		12.47	□□□□□ -0.41
CSK-211	ENST00000568329	ZNF546	Q86UE3	836 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms