RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 THBS3P49746 956 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
COMMD4-221ENST00000567935 BAXQ07812 192 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 TMEM155Q4W5P6 130 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 TMEM158Q8WZ71 300 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 RAB1CQ92928 201 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 CYTL1Q9NRR1 136 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 C19orf12Q9NSK7 152 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 M0R1X1 148 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 MED6O75586 246 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 HPRT1P00492 218 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 TAS2R30P59541 319 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 RPL23AP62750 156 aaKnown RBP12□□□□□ -0.49
COMMD4-221ENST00000567935 CT45A1Q5HYN5 189 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
COMMD4-221ENST00000567935 CT45A3Q8NHU0 189 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 Q96MF0 132 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 S1PR3Q99500 378 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 LYRM2Q9NU23 88 aaPredicted RBP12□□□□□ -0.49
COMMD4-221ENST00000567935 BEX4Q9NWD9 120 aaPredicted RBP12□□□□□ -0.49
COMMD4-221ENST00000567935 CACNG5Q9UF02 275 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 MIOXQ9UGB7 285 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 AUP1Q9Y679 476 aa12□□□□□ -0.49
COMMD4-221ENST00000567935 C17orf98A8MV24 154 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 HAX1O00165 279 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 RBP4P02753 201 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 P0C879 139 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 EPHA1P21709 976 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 OMGP23515 440 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 NFYBP25208 207 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 TMEM33P57088 247 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 POLR2GP62487 172 aaKnown RBP eCLIP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 TAGLNQ01995 201 aaKnown RBP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 CXorf66Q5JRM2 361 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 FAM53AQ6NSI3 398 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 PDZD9Q8IXQ8 264 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 LINC00311Q8N616 119 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-221ENST00000567935 CTSZQ9UBR2 303 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 FBXL17Q9UF56 701 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
COMMD4-221ENST00000567935 A0A087X0M5 115 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 A0A0G2JRQ6 117 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 A0A1B0GX30 115 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 LINC00473A8K010 186 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 SSSCA1O60232 199 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 SCAF4O95104 1147 aaKnown RBP11.98□□□□□ -0.49
COMMD4-221ENST00000567935 COL8A2P25067 703 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF134P52741 427 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 ERVK-16P61578 105 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF273Q14593 569 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 PRAMEF5Q5TYX0 476 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 DHRS7BQ6IAN0 325 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-221ENST00000567935 BTNL3Q6UXE8 466 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 H2BFWTQ7Z2G1 175 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 UBAC2Q8NBM4 344 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 OR8B3Q8NGG8 313 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF596Q8TC21 504 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 NEIL1Q96FI4 390 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-221ENST00000567935 OR8B2Q96RD0 313 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 CHODLQ9H9P2 273 aa11.98□□□□□ -0.49
COMMD4-221ENST00000567935 MEX3AA1L020 520 aaKnown RBP11.97□□□□□ -0.49
COMMD4-221ENST00000567935 SYNGR2O43760 224 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 RAMP3O60896 148 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 S1PR2O95136 353 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 SOD3P08294 240 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 NMBP08949 121 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 EWSR1Q01844 656 aaKnown RBP eCLIP11.97□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF816Q0VGE8 651 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF266Q14584 549 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 C8orf46Q8TAG6 207 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 DDB2Q92466 427 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 TNFRSF14Q92956 283 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 SMIM8Q96KF7 97 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 AIFM2Q9BRQ8 373 aa11.97□□□□□ -0.49
COMMD4-221ENST00000567935 SAA2-SAA4A0A096LPE2 208 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 hCG_1809904A0A1W2PP81 198 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 A0A1W2PPE2 198 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 A0A1W2PR64 198 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 A0A1W2PRV1 198 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 SLC31A2O15432 143 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 KCNAB3O43448 404 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 CHST1O43916 411 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 FCGR3BO75015 233 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 PROP1O75360 226 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 FCN3O75636 299 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 KRASP01116 189 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 SAA2P0DJI9 122 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-221ENST00000567935 RRASP10301 218 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 NQO2P16083 231 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms