RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 C19orf12Q9NSK7 152 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 KIAA1456Q9P272 454 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 OR2W1Q9Y3N9 320 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 WSB1Q9Y6I7 421 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 ALPK2Q86TB3 2170 aa4.41□□□□□ -1.7
CAPN3-217ENST00000567817 ZGRF1Q86YA3 2104 aa4.4□□□□□ -1.7
CAPN3-217ENST00000567817 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.7
CAPN3-217ENST00000567817 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 TRAV1-1A0A0B4J248 108 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 TRGV8A0A0C4DH27 118 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PINLYPA6NC86 204 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SLC22A20A6NK97 555 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 FAM74A7A6NL05 159 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 FAM157AC9JC47 383 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 TGOLN2O43493 480 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 IFNA5P01569 189 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 HLA-HP01893 362 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SERPINE2P07093 398 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 OR8U8P0C7N1 319 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PATE4P0C8F1 98 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 BCL3P20749 454 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 CCNOP22674 350 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 F2RP25116 425 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MAGEA5P43359 124 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 LPAR6P43657 344 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PCP4P48539 62 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 RAB13P51153 203 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 GPM6AP51674 278 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 ARHGDIBP52566 201 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 TAS2R30P59541 319 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 UBE2NP61088 152 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF616Q08AN1 781 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SP6Q3SY56 376 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 FAM74A3Q4VXF1 159 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 NMSQ5H8A3 153 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 OR2A2Q6IF42 318 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 IGFL2Q6UWQ7 119 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MEX3BQ6ZN04 569 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 FAM219AQ8IW50 185 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 H1FOOQ8IZA3 346 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SELENOHQ8IZQ5 122 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 C17orf78Q8N4C9 275 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 TMEM252Q8N6L7 170 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SUMF2Q8NBJ7 301 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 OR10G4Q8NGN3 311 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 OR1K1Q8NGR3 316 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 FGFBP3Q8TAT2 258 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MRPL30Q8TCC3 161 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 PARD6GQ9BYG4 376 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 EGLN1Q9GZT9 426 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 SLC35B3Q9H1N7 401 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 OR51I2Q9H344 312 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 LIME1Q9H400 295 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 C11orf1Q9H5F2 150 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 COA4Q9NYJ1 87 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MTCH1Q9NZJ7 389 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 RCL1Q9Y2P8 373 aaKnown RBP4.4□□□□□ -1.71
CAPN3-217ENST00000567817 RTTNQ86VV8 2226 aa4.4□□□□□ -1.71
CAPN3-217ENST00000567817 MYO7BQ6PIF6 2116 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TRGV5A0A0B4J1U4 118 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 NKX2-6A6NCS4 301 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 C1orf196B1AJZ1 125 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 K7N7A8 449 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 HSPB1P04792 205 aaKnown RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 S100A8P05109 93 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 PRKACAP17612 351 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 RCC1P18754 421 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 NPBWR2P48146 333 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SULT1A1P50225 295 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 PPT1P50897 306 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TDGF1P3P51864 188 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 AKR1C2P52895 323 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 HBG1P69891 147 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 HBG2P69892 147 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ARG2P78540 354 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SERF2P84101 59 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 PAX5Q02548 391 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 AKR1C1Q04828 323 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SRYQ05066 204 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 PNRC1Q12796 327 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 CLINT1Q14677 625 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF146Q15072 292 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 AKR1C8PQ5T2L2 129 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF324BQ6AW86 544 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TRAT1Q6PIZ9 186 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 GFRALQ6UXV0 394 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF818PQ6ZRF7 136 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF561Q8N587 486 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 OR10V1Q8NGI7 309 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms