RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 C17orf112F2Z3M2 114 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 ATXN7O15265 892 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-213ENST00000566756 TNFSF13O75888 250 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 LYZL6O75951 148 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 ADH4P08319 380 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 TRGC1P0CF51 173 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-213ENST00000566756 AESQ08117 197 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-213ENST00000566756 SMIM21Q3B7S5 101 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 VWA1Q6PCB0 445 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 WDR82Q6UXN9 313 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 SEM1Q6ZVN7 128 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 H2BFWTQ7Z2G1 175 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 OR10G9Q8NGN4 311 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 OR10G7Q8NGN6 311 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 DIRC2Q96SL1 478 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 C17orf98A8MV24 154 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 CGAP01215 116 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 FGF7P21781 194 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 FOXF2Q12947 444 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 FRZBQ92765 325 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 CLN8Q9UBY8 286 aa13.98□□□□□ -0.17
CMTM3-213ENST00000566756 SMCO3A2RU48 225 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 PFN1P07737 140 aaKnown RBP13.97□□□□□ -0.17
CMTM3-213ENST00000566756 TIMP3P35625 211 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 GABRA2P47869 451 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 BSXQ3C1V8 233 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 BEND4Q6ZU67 534 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 ZNF709Q8N972 641 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 OR10A7Q8NGE5 316 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 NPCDR1Q9BY65 106 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
CMTM3-213ENST00000566756 ZNF729A6NN14 1252 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-213ENST00000566756 WNT9BO14905 357 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 ZG16O60844 167 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 VENTXO95231 258 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 C1orf185Q5T7R7 199 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 ZNF808Q8N4W9 903 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-213ENST00000566756 Q8NA96 180 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 FAM57AQ8TBR7 257 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 ANAPC16Q96DE5 110 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 STARD4Q96DR4 205 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 PROCRQ9UNN8 238 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 FAM215AQ9Y5M1 114 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 SPTBN4Q9H254 2564 aa13.96□□□□□ -0.17
CMTM3-213ENST00000566756 OR5H1A6NKK0 313 aa13.96□□□□□ -0.18
CMTM3-213ENST00000566756 SPINT2O43291 252 aa13.96□□□□□ -0.18
CMTM3-213ENST00000566756 GATCO43716 136 aaKnown RBP13.96□□□□□ -0.18
CMTM3-213ENST00000566756 SOD3P08294 240 aa13.96□□□□□ -0.18
CMTM3-213ENST00000566756 MBNL2Q5VZF2 373 aaKnown RBP13.96□□□□□ -0.18
CMTM3-213ENST00000566756 MRGPRDQ8TDS7 321 aa13.96□□□□□ -0.18
CMTM3-213ENST00000566756 RAB1CQ92928 201 aa13.96□□□□□ -0.18
CMTM3-213ENST00000566756 IGLV1-44P01699 117 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 CD55P08174 381 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 TDGF1P3P51864 188 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 RPL23P62829 140 aaKnown RBP13.95□□□□□ -0.18
CMTM3-213ENST00000566756 RPP30P78346 268 aaKnown RBP13.95□□□□□ -0.18
CMTM3-213ENST00000566756 P2RY6Q15077 328 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 ADIRFQ15847 76 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 ACOT6Q3I5F7 207 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-213ENST00000566756 ZNF718Q3SXZ3 478 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 ZNF826PQ6ZT77 177 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 FAM90A1Q86YD7 464 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 SLC25A22Q9H936 323 aa13.95□□□□□ -0.18
CMTM3-213ENST00000566756 TRAV20A0A0B4J274 112 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 C15orf65H3BRN8 121 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 TIMM8AO60220 97 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 COL10A1Q03692 680 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 CR1LQ2VPA4 569 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 PDLIM3Q53GG5 364 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR2B11Q5JQS5 317 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 Q6ZR03 302 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 C16orf82Q7Z2V1 217 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 FAM169BQ8N8A8 192 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR10D4PQ8NGN7 298 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 RAB24Q969Q5 203 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 PARLQ9H300 379 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 ZNF71Q9NQZ8 489 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 ZMAT5Q9UDW3 170 aaKnown RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 MARCH11A6NNE9 402 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 MPDU1O75352 247 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 HIST1H1BP16401 226 aaKnown RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR51G1Q8NGK1 321 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR13A1Q8NGR1 328 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR52E5Q8NH55 327 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-213ENST00000566756 OR5B12Q96R08 314 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 SSX3Q99909 188 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 WDR83OSQ9Y284 106 aa13.94□□□□□ -0.18
CMTM3-213ENST00000566756 LINC00473A8K010 186 aa13.93□□□□□ -0.18
CMTM3-213ENST00000566756 H7BYZ3 331 aa13.93□□□□□ -0.18
CMTM3-213ENST00000566756 GZMHP20718 246 aa13.93□□□□□ -0.18
CMTM3-213ENST00000566756 GCH1P30793 250 aa13.93□□□□□ -0.18
CMTM3-213ENST00000566756 CEACAM8P31997 349 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms