RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 RRNAD1Q96FB5 475 aaKnown RBP14.38□□□□□ -0.11
HERC2-208ENST00000566635 SPIN2AQ99865 258 aa14.38□□□□□ -0.11
HERC2-208ENST00000566635 SPIN2BQ9BPZ2 258 aa14.38□□□□□ -0.11
HERC2-208ENST00000566635 RNF126Q9BV68 326 aa14.38□□□□□ -0.11
HERC2-208ENST00000566635 SVEP1Q4LDE5 3571 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 SLC25A4P12235 298 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 DEFB113Q30KQ7 82 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 OR4P4Q8NGL7 312 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 CD300LFQ8TDQ1 290 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 TNFRSF14Q92956 283 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 TMEM186Q96B77 213 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 ADTRPQ96IZ2 230 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 CITED4Q96RK1 184 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 CACNG5Q9UF02 275 aa14.37□□□□□ -0.11
HERC2-208ENST00000566635 HMSDA8MTL9 139 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 K7EPK0 472 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 PRTN3P24158 256 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 PRRX1P54821 245 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 FAM71E2Q8N5Q1 922 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 BEND2Q8NDZ0 799 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 OR13D1Q8NGV5 346 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 OR1S1Q8NH92 325 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 DCUN1D4Q92564 292 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 R3HDM4Q96D70 268 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 SIRPDQ9H106 197 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 BEX4Q9NWD9 120 aaPredicted RBP14.36□□□□□ -0.11
HERC2-208ENST00000566635 NUP50Q9UKX7 468 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 KPTNQ9Y664 436 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 NAV2Q8IVL1 2488 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 PIGBOS1A0A0B4J2F0 54 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 RBFOX2O43251 390 aaKnown RBP eCLIP14.36□□□□□ -0.11
HERC2-208ENST00000566635 HPRT1P00492 218 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 P0C879 139 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 KIR2DS2P43631 304 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 CXorf66Q5JRM2 361 aaPredicted RBP14.36□□□□□ -0.11
HERC2-208ENST00000566635 FAM71F2Q6NXP2 309 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 PRSS54Q6PEW0 395 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 ZNF546Q86UE3 836 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 OR4S2Q8NH73 311 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 NABP2Q9BQ15 211 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 PLEKHA2Q9HB19 425 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 MMP24Q9Y5R2 645 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 AUP1Q9Y679 476 aa14.36□□□□□ -0.11
HERC2-208ENST00000566635 LEUTXA8MZ59 168 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 BUB1B-PAK6H3BSN5 160 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 ARG1P05089 322 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 IL3RAP26951 378 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 LDLRAD2Q5SZI1 272 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 SSX9Q7RTT3 188 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 TGIF2LXQ8IUE1 241 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 VKORC1L1Q8N0U8 176 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 PCGF1Q9BSM1 259 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 SLC35D1Q9NTN3 355 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 WNK2Q9Y3S1 2297 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 A0A1W2PRD5 423 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 A0A1W2PRF3 423 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 A0A1W2PRM7 423 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 PITX3O75364 302 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 IGKV1-16P04430 117 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 MMP9P14780 707 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 HOXB4P17483 251 aaPredicted RBP14.35□□□□□ -0.11
HERC2-208ENST00000566635 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
HERC2-208ENST00000566635 SMCO1Q147U7 214 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 C1orf122Q6ZSJ8 110 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 OR11H6Q8NGC7 330 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 MAGT1Q9H0U3 335 aa14.35□□□□□ -0.11
HERC2-208ENST00000566635 RCL1Q9Y2P8 373 aaKnown RBP14.35□□□□□ -0.11
HERC2-208ENST00000566635 A0A1B0GU03 582 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 RNF222A6NCQ9 220 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 RNASEK-C17orf49H0YIS7 233 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 H0YJW9 148 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 L7N2F9 121 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 DEDDO75618 318 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 LYL1P12980 280 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 SLC25A16P16260 332 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 NKX2-1P43699 371 aaPredicted RBP14.34□□□□□ -0.11
HERC2-208ENST00000566635 TMEM65Q6PI78 240 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
HERC2-208ENST00000566635 POMT1Q9Y6A1 747 aa14.34□□□□□ -0.11
HERC2-208ENST00000566635 LINC00862A6NCI5 91 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 ODF3BA8MYP8 253 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 PET100P0DJ07 73 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 SLC25A6P12236 298 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.11
HERC2-208ENST00000566635 TBX15Q96SF7 602 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 MFFQ9GZY8 342 aa14.33□□□□□ -0.11
HERC2-208ENST00000566635 ST8SIA3O43173 380 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 ATG12O94817 140 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 TOX4O94842 621 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 USF1P22415 310 aaPredicted RBP14.33□□□□□ -0.12
HERC2-208ENST00000566635 TAGLNQ01995 201 aaKnown RBP14.33□□□□□ -0.12
HERC2-208ENST00000566635 RTL8BQ17RB0 113 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 MIDNQ504T8 468 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 H2BFWTQ7Z2G1 175 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 DMBX1Q8NFW5 382 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 OR5AN1Q8NGI8 311 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 HEXA-AS1Q9H8Q6 139 aa14.33□□□□□ -0.12
HERC2-208ENST00000566635 UNKLQ9H9P5 680 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms