RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 IGHV2-70DA0A0C4DH43 119 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGKV1-9A0A0C4DH69 117 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGKV1-12A0A0C4DH73 117 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 A0A0G2JMP0 313 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 A0A0U1RRA0 63 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 A0A0X1KG70 313 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PNMA8CA0A1B0GUJ8 204 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 C7orf66A4D0T2 115 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CCDC182A6NF36 153 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 A6NIZ1 184 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 OR2AT4A6NND4 320 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 RIIAD1A6NNX1 92 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ANKRD30BLA7E2S9 258 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 BBIP1A8MTZ0 92 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IQCF6A8MYZ5 107 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ZNF879B4DU55 563 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ZNF736B4DX44 427 aaPredicted RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 G3V2T6 193 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 H3BUX3 64 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 J3QLW9 94 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 J3QRK9 145 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 M0R135 149 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 LGALS8O00214 317 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NDUFS8O00217 210 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SIRPB1O00241 398 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NDUFAB1O14561 156 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NPFFO15130 113 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ARPC3O15145 178 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 GYG2O15488 501 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NDUFB3O43676 98 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CHST1O43916 411 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 FKBP6O75344 327 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ENTPD6O75354 484 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ENTPD5O75356 428 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 E2F6O75461 281 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CDRT1O95170 752 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SNAP29O95721 258 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 BAG2O95816 211 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NRASP01111 189 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 NPPAP01160 153 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PTHP01270 115 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGKV1D-12P01611 117 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGHV1-69P01742 117 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGHMP01871 453 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ERCC1P07992 297 aaPredicted RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 GNAO1P09471 354 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 H2BFMP0C1H6 154 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PPIAL4GP0DN37 164 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 IGHV3-43DP0DP04 118 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ALOX5APP20292 161 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 KITLGP21583 273 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SLC2A5P22732 501 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 HSD11B1P28845 292 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CRABP1P29762 137 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CFHR2P36980 270 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 HAAOP46952 286 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 REG1BP48304 166 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PITPNBP48739 271 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 TGM4P49221 684 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SRP9P49458 86 aaKnown RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 RGS6P49758 472 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CRISP1P54107 249 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CXCR4P61073 352 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 RAP1BP61224 184 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PCBD1P61457 104 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 LSM6P62312 80 aaKnown RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 RAP1AP62834 184 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 RPL31P62899 125 aaKnown RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 CDK5Q00535 292 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 AESQ08117 197 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SCRN3Q0VDG4 424 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 TSPAN31Q12999 210 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ECH1Q13011 328 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PRDX4Q13162 271 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 DYNC1I2Q13409 638 aaKnown RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 AQP6Q13520 282 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 GK3PQ14409 553 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 EDDM3AQ14507 147 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 MAPRE2Q15555 327 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SSX2Q16385 188 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 CEACAM21Q3KPI0 293 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ZNF404Q494X3 552 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 TP53I3Q53FA7 332 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 COQ5Q5HYK3 327 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 DEFB121Q5J5C9 76 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 SAMD4BQ5PRF9 694 aaKnown RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 FAM27D1Q5T7N8 215 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 PRAMEF5Q5TYX0 476 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 OR2G6Q5TZ20 316 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 LPCAT4Q643R3 524 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 XAF1Q6GPH4 301 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 OR2T5Q6IEZ7 315 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 OR10K2Q6IF99 312 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ERICH5Q6P6B1 374 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 HAGHLQ6PII5 290 aaPredicted RBP0.8□□□□□ -2.28
SMG1-212ENST00000566328 WDR82Q6UXN9 313 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 FBXW12Q6X9E4 464 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 HACD2Q6Y1H2 254 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 ZNF620Q6ZNG0 422 aa0.8□□□□□ -2.28
SMG1-212ENST00000566328 RASSF6Q6ZTQ3 369 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms