RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 FAM212BQ9NTI7 297 aaPredicted RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 C1RLQ9NZP8 487 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 SOX21Q9Y651 276 aaPredicted RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 YLPM1P49750 1951 aaKnown RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 HIVEP2P31629 2446 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 MDFIC2A0A1B0GVS7 189 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 FAM90A9PA6NNJ1 464 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 H3BUX3 64 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 RBFOX2O43251 390 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH1-208ENST00000565810 PRAF2O60831 178 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 VENTXO95231 258 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 SFT2D2O95562 160 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 CRYZL1O95825 349 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 MOSP00540 346 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 HRASP01112 189 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 IL5P05113 134 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 SNRNP70P08621 437 aaKnown RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 OR5AC1P0C628 307 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 TMEM11P17152 192 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 LPAR6P43657 344 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 LGALS7P47929 136 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 RAB25P57735 213 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 ERVK-16P61578 105 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 SRPXP78539 464 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 PPP1R1AQ13522 171 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 HNF4GQ14541 408 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 OXA1LQ15070 435 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 SP6Q3SY56 376 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 ZNF695Q8IW36 515 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 LGI3Q8N145 548 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 TMEM86BQ8N661 226 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 OR8H1Q8NGG4 311 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 COQ8AQ8NI60 647 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 CASTOR1Q8WTX7 329 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 DDB2Q92466 427 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 CFHR4Q92496 578 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 TMEM230Q96A57 120 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 GALNT14Q96FL9 552 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 EAF1Q96JC9 268 aaPredicted RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 HARBI1Q96MB7 349 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 ZNF48Q96MX3 618 aaPredicted RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 TSNAXQ99598 290 aaKnown RBP6.26□□□□□ -1.41
CDH1-208ENST00000565810 MARVELD1Q9BSK0 173 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 PRDM13Q9H4Q3 707 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 PLEKHA2Q9HB19 425 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 RAB18Q9NP72 206 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 KIAA1456Q9P272 454 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 POMT1Q9Y6A1 747 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 ZFHX3Q15911 3703 aa6.26□□□□□ -1.41
CDH1-208ENST00000565810 ACANP16112 2415 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 ABCA2Q9BZC7 2435 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 C9orf170A2RU37 121 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 NCBP2LA6PVI3 153 aaKnown RBP6.25□□□□□ -1.41
CDH1-208ENST00000565810 HOXA3O43365 443 aaPredicted RBP6.25□□□□□ -1.41
CDH1-208ENST00000565810 IGHV4-59P01825 116 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 IGKV1-16P04430 117 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 NQO2P16083 231 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 SPNP16150 400 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 CD24P25063 80 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 UCP1P25874 307 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 IER3P46695 156 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 MECP2P51608 486 aaKnown RBP6.25□□□□□ -1.41
CDH1-208ENST00000565810 DHRS2Q13268 280 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 EBI3Q14213 229 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 PLGLAQ15195 96 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 SLC9A3R2Q15599 337 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 LY6EQ16553 131 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 VMA21Q3ZAQ7 101 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 TMEM177Q53S58 311 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 LIAT1Q6ZQX7 453 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 C16orf82Q7Z2V1 217 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 LYG2Q86SG7 212 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 DMBX1Q8NFW5 382 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 RNASE11Q8TAA1 199 aaKnown RBP6.25□□□□□ -1.41
CDH1-208ENST00000565810 VSTM2AQ8TAG5 236 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 CHPT1Q8WUD6 406 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 RRNAD1Q96FB5 475 aaKnown RBP6.25□□□□□ -1.41
CDH1-208ENST00000565810 TP53RKQ96S44 253 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 PHB2Q99623 299 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 TMEM222Q9H0R3 208 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 TNFRSF19Q9NS68 423 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 COMMD9Q9P000 198 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 TCF19Q9Y242 345 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 ZANQ9Y493 2812 aa6.25□□□□□ -1.41
CDH1-208ENST00000565810 DSCAML1Q8TD84 2053 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 A6NDX4 124 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 SNRPGP15A8MWD9 76 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 M0QZK8 103 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 NBR2O15453 112 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 CREBL2O60519 120 aaPredicted RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 RAMP3O60896 148 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 OR2F2O95006 317 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 SPDEFO95238 335 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 DUS4LO95620 317 aaKnown RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 CDS2O95674 445 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 KRASP01116 189 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 VSIG10L2P0DP72 767 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms