RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 OR51G1Q8NGK1 321 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 LAMP3Q9UQV4 416 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 PAGE4O60829 102 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 WISP2O76076 250 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 MISP3Q96FF7 219 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 ZFHX4Q86UP3 3567 aa12.93□□□□□ -0.34
GTF3C1-205ENST00000564747 COX5AP20674 150 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 GALR1P47211 349 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 USF2Q15853 346 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 OR13A1Q8NGR1 328 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 DCTN5Q9BTE1 182 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 ZDHHC11Q9H8X9 412 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 XKRY2A2RUG3 117 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 A8MWP6 167 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 PPP5D1E7EU14 171 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 H7BYZ3 331 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 RAB29O14966 203 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 MBP02144 154 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 PLPPR2Q96GM1 343 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 MRPL37Q9BZE1 423 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 PSG11Q9UQ72 335 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 WDR82Q6UXN9 313 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 ZNF709Q8N972 641 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 NOL4LQ96MY1 436 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 PCGF1Q9BSM1 259 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 MSL2Q9HCI7 577 aa12.92□□□□□ -0.34
GTF3C1-205ENST00000564747 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 LTC4SQ16873 150 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 LURAP1Q96LR2 239 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 MARCH11A6NNE9 402 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 NPPCP23582 126 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 FABP6P51161 128 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 ZNF66Q6ZN08 573 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 OR5T1Q8NG75 326 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 TRIB1Q96RU8 372 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 MANBALQ9NQG1 85 aa12.91□□□□□ -0.34
GTF3C1-205ENST00000564747 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 BMP5P22003 454 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 TGIF2LYQ8IUE0 185 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 QTRT1Q9BXR0 403 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 GYPAP02724 150 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 FOXF2Q12947 444 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 P2RY6Q15077 328 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 COA6Q5JTJ3 125 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 Q6ZT83 130 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 CXXC4Q9H2H0 198 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 TP53TG5Q9Y2B4 290 aa12.9□□□□□ -0.34
GTF3C1-205ENST00000564747 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 ZNF124Q15973 351 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 Q8N7P7 452 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 TAAR6Q96RI8 345 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 C11orf94C9JXX5 98 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 PROP1O75360 226 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 EGR1P18146 543 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 GNB2P62879 340 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 HES3Q5TGS1 186 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 NEIL1Q96FI4 390 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 AURKAIP1Q9NWT8 199 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
GTF3C1-205ENST00000564747 TRAV38-1A0A0B4J264 116 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 HRASP01112 189 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 GCGP01275 180 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 IGKV3-15P01624 115 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 CRYAAP02489 173 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 EDDM3AQ14507 147 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 TMEM178AQ8NBL3 297 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 PRR7Q8TB68 274 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 SOX8P57073 446 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 VWA1Q6PCB0 445 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 R3HDM4Q96D70 268 aa12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 HSD17B10Q99714 261 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-205ENST00000564747 UBE2G2P60604 165 aa12.87□□□□□ -0.35
GTF3C1-205ENST00000564747 SPCS3P61009 180 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms