RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TIPINQ9BVW5 301 aa0.9□□□□□ -2.27
CHD9-211ENST00000564600 DERL2Q9GZP9 239 aa0.9□□□□□ -2.27
CHD9-211ENST00000564600 NSRP1Q9H0G5 558 aaKnown RBP0.9□□□□□ -2.27
CHD9-211ENST00000564600 AK3Q9UIJ7 227 aa0.9□□□□□ -2.27
CHD9-211ENST00000564600 C3orf18Q9UK00 162 aa0.9□□□□□ -2.27
CHD9-211ENST00000564600 SCN9AQ15858 1988 aa0.9□□□□□ -2.27
CHD9-211ENST00000564600 KDM5BQ9UGL1 1544 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 SMARCA4P51532 1647 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 SNAPC4Q5SXM2 1469 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 A0A1W2PQL4 384 aaPredicted RBP0.89□□□□□ -2.27
CHD9-211ENST00000564600 K7EQS6 105 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 GNRH2O43555 120 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 ATP6V1G2O95670 118 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 IGHV1-69P01742 117 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 KRT7P08729 469 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 ZNF728P0DKX0 622 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 UGT2B7P16662 529 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 CXCL2P19875 107 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 CXCL3P19876 107 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 CSRP1P21291 193 aaKnown RBP0.89□□□□□ -2.27
CHD9-211ENST00000564600 S100A2P29034 98 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 GRPRP30550 384 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 ALDH3A1P30838 453 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 TBPL1P62380 186 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 POLR2GP62487 172 aaKnown RBP eCLIP0.89□□□□□ -2.27
CHD9-211ENST00000564600 HIST3H3Q16695 136 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 COQ5Q5HYK3 327 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 PTRHD1Q6GMV3 140 aaKnown RBP0.89□□□□□ -2.27
CHD9-211ENST00000564600 AMTNQ6UX39 209 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 GPHB5Q86YW7 130 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 OR4K13Q8NH42 304 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.89□□□□□ -2.27
CHD9-211ENST00000564600 PTH2Q96A98 100 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 ANKRD36BP1Q96IX9 119 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 CCL13Q99616 98 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 UPF3BQ9BZI7 483 aaKnown RBP0.89□□□□□ -2.27
CHD9-211ENST00000564600 MAP1LC3AQ9H492 121 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 SLC2A9Q9NRM0 540 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 RSL24D1Q9UHA3 163 aaKnown RBP0.89□□□□□ -2.27
CHD9-211ENST00000564600 DKKL1Q9UK85 242 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 SNX12Q9UMY4 172 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 HDGFL3Q9Y3E1 203 aa0.89□□□□□ -2.27
CHD9-211ENST00000564600 SIPA1L1O43166 1804 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 TRGV4A0A0C4DH28 118 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 IGHV1-69-2A0A0G2JMI3 117 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 A0A0J9YX75 114 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 A0A1B0GV50 99 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 OR11H12B2RN74 326 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 H0Y980 276 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 M0QZ92 97 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 MRASO14807 208 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 PFDN6O15212 129 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 PRB1P04280 392 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 SERPINA6P08185 405 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CPMP14384 443 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CBR1P16152 277 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CD36P16671 472 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 GZMHP20718 246 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 RPL27AP46776 148 aaKnown RBP0.88□□□□□ -2.27
CHD9-211ENST00000564600 MARCKSL1P49006 195 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CTBP2P56545 445 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 TMEM33P57088 247 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 ACTBP60709 375 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 NAA20P61599 178 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 DYNLL1P63167 89 aaKnown RBP0.88□□□□□ -2.27
CHD9-211ENST00000564600 ACTG1P63261 375 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 FOXF1Q12946 379 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 GNA13Q14344 377 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CDKL4Q5MAI5 379 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CLVS2Q5SYC1 327 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 C1orf194Q5T5A4 169 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 SFXN4Q6P4A7 337 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 C5orf46Q6UWT4 87 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 ATP5L2Q7Z4Y8 100 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 C1orf174Q8IYL3 243 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 DEFB125Q8N687 156 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 CNEP1R1Q8N9A8 125 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 MNS1Q8NEH6 495 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 OR11H2Q8NH07 326 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 LHFPL5Q8TAF8 219 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 RNASE6Q93091 150 aaKnown RBP0.88□□□□□ -2.27
CHD9-211ENST00000564600 HRASLSQ9HDD0 168 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 NUP160Q12769 1436 aa0.88□□□□□ -2.27
CHD9-211ENST00000564600 MPDZO75970 2070 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 ADCY9O60503 1353 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 IGLV3-9A0A075B6K5 115 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 TRGV5A0A0B4J1U4 118 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 OR4C45A6NMZ5 311 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 C2orf74A8MZ97 194 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 E2F6O75461 281 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 CRTAPO75718 401 aaPredicted RBP0.87□□□□□ -2.27
CHD9-211ENST00000564600 C1QAP02745 245 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 TYMSP04818 313 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 CCL5P13501 91 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 UCHL3P15374 230 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 CCL1P22362 96 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 RPL12P30050 165 aaKnown RBP0.87□□□□□ -2.27
CHD9-211ENST00000564600 GABRA2P47869 451 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 SULT1A2P50226 295 aa0.87□□□□□ -2.27
CHD9-211ENST00000564600 NKX2-5P52952 324 aaPredicted RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms