RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 FCER2P06734 321 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 GNRHRP30968 328 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 FAUP35544 74 aaKnown RBP13.24□□□□□ -0.29
RNF40-206ENST00000564260 F2RL1P55085 397 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 FXYD4P59646 89 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 ZNF45Q02386 682 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 SURF2Q15527 256 aaPredicted RBP13.24□□□□□ -0.29
RNF40-206ENST00000564260 GLDNQ6ZMI3 551 aaPredicted RBP13.24□□□□□ -0.29
RNF40-206ENST00000564260 SLC35E3Q7Z769 313 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 Q8N402 240 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 MFSD4AQ8N468 514 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 POC5Q8NA72 575 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 CHPT1Q8WUD6 406 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 PRRT1Q99946 306 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 SLC2A8Q9NY64 477 aa13.24□□□□□ -0.29
RNF40-206ENST00000564260 LINC00473A8K010 186 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 DISC1C4P0D8 188 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 IGF1P05019 195 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
RNF40-206ENST00000564260 PYDC2Q56P42 97 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 AADACL3Q5VUY0 350 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 LIN54Q6MZP7 749 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 CADM3Q8N126 398 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 COMMD1Q8N668 190 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 TERB2Q8NHR7 220 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 WIPF2Q8TF74 440 aaPredicted RBP13.23□□□□□ -0.29
RNF40-206ENST00000564260 HARBI1Q96MB7 349 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 CITED1Q99966 193 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 THAP7Q9BT49 309 aaPredicted RBP13.23□□□□□ -0.29
RNF40-206ENST00000564260 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
RNF40-206ENST00000564260 TENM1Q9UKZ4 2725 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 SHOXO15266 292 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 B3GALNT1O75752 331 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 FGF2P09038 288 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 UBE2KP61086 200 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 PSG5Q15238 335 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 ZNF79Q15937 498 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 VMA21Q3ZAQ7 101 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 KLHDC1Q8N7A1 406 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 ZFAND1Q8TCF1 268 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 TCTEX1D2Q8WW35 142 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 RSRP1Q9BUV0 290 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 TINAGL1Q9GZM7 467 aaPredicted RBP13.22□□□□□ -0.29
RNF40-206ENST00000564260 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
RNF40-206ENST00000564260 J3QRK9 145 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 M0QYG6 137 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 HRASP01112 189 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 RND3P61587 244 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 SLC35B1P78383 322 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 PLGLAQ15195 96 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 RNASE12Q5GAN4 147 aaKnown RBP13.21□□□□□ -0.29
RNF40-206ENST00000564260 ZNF562Q6V9R5 426 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 SCGB3A2Q96PL1 93 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 PTTG2Q9NZH5 202 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.29
RNF40-206ENST00000564260 FCGR3BO75015 233 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 CRYZL1O95825 349 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 HPRT1P00492 218 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
RNF40-206ENST00000564260 TAS2R31P59538 309 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 RPL30P62888 115 aaKnown RBP13.2□□□□□ -0.3
RNF40-206ENST00000564260 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 Q6ZS46 218 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 TAF15Q92804 592 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF40-206ENST00000564260 RITA1Q96K30 269 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 PLEKHA2Q9HB19 425 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 COMMD9Q9P000 198 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 METTL1Q9UBP6 276 aaKnown RBP13.2□□□□□ -0.3
RNF40-206ENST00000564260 SIGLEC9Q9Y336 463 aa13.2□□□□□ -0.3
RNF40-206ENST00000564260 DNHD1Q96M86 4753 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 PGLYRP1O75594 196 aaPredicted RBP13.19□□□□□ -0.3
RNF40-206ENST00000564260 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 CRYGBP07316 175 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 F2RP25116 425 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 LINC00205P59089 165 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
RNF40-206ENST00000564260 SPAG16Q8N0X2 631 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 STPG2Q8N412 459 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 OR4X2Q8NGF9 303 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 OR4C16Q8NGL9 310 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 SGMS2Q8NHU3 365 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 TMEM68Q96MH6 324 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
RNF40-206ENST00000564260 IGHV7-81A0A0B4J1V7 117 aa13.18□□□□□ -0.3
RNF40-206ENST00000564260 HAX1O00165 279 aa13.18□□□□□ -0.3
RNF40-206ENST00000564260 ZNF735P0CB33 412 aa13.18□□□□□ -0.3
RNF40-206ENST00000564260 VSIG10L2P0DP72 767 aa13.18□□□□□ -0.3
RNF40-206ENST00000564260 RPA2P15927 270 aa13.18□□□□□ -0.3
RNF40-206ENST00000564260 CNTFRP26992 372 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms