RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 TEX45Q8NA69 505 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 MINDY2Q8NBR6 621 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 GIMAP1Q8WWP7 306 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 C5orf30Q96GV9 206 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 UBE2E2Q96LR5 201 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 NAA50Q9GZZ1 169 aaKnown RBP10.48□□□□□ -0.73
CLK3-213ENST00000563842 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
CLK3-213ENST00000563842 NUBP2Q9Y5Y2 271 aa10.48□□□□□ -0.73
CLK3-213ENST00000563842 IGKV1D-13A0A0B4J2D9 117 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 A0A1W2PN81 502 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 MEIS3P1A6NDR6 274 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 LINC00473A8K010 186 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 FCN1O00602 326 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 CREBL2O60519 120 aaPredicted RBP10.47□□□□□ -0.73
CLK3-213ENST00000563842 CRYZL1O95825 349 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 PPYP01298 95 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 EIF4EP06730 217 aaKnown RBP10.47□□□□□ -0.73
CLK3-213ENST00000563842 IGKV1-13P0DP09 117 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 CHRNA7P36544 502 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 NDPQ00604 133 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 FXYD3Q14802 87 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CLK3-213ENST00000563842 UNQ5815/PRO19632Q6UWF5 114 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 OVCH2Q7RTZ1 564 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 OR5M8Q8NGP6 311 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 SECTM1Q8WVN6 248 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 SNAPC3Q92966 411 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 BCL7BQ9BQE9 202 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 MCRIP2Q9BUT9 160 aaKnown RBP10.47□□□□□ -0.73
CLK3-213ENST00000563842 SCPEP1Q9HB40 452 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
CLK3-213ENST00000563842 FAM25AB3EWG3 89 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 FAM25CB3EWG5 89 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 FAM25GB3EWG6 89 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 CCL24O00175 119 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 SULT1C2O00338 296 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 HPGDSO60760 199 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 FCGR3BO75015 233 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 TPPPO94811 219 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 CRYGBP07316 175 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 NAT1P18440 290 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 ELK1P19419 428 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 AADACP22760 399 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 RAB9AP51151 201 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 UBE2KP61086 200 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 HERV-K104P61576 105 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 MRPL41Q8IXM3 137 aaKnown RBP10.46□□□□□ -0.73
CLK3-213ENST00000563842 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 OR5H2Q8NGV7 314 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 OR4S2Q8NH73 311 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 MYOZ3Q8TDC0 251 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 RAB2BQ8WUD1 216 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 C15orf40Q8WUR7 153 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 TCTEX1D2Q8WW35 142 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 P2RX4Q99571 388 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 SLC5A7Q9GZV3 580 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 EHFQ9NZC4 300 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 A3GALT2U3KPV4 340 aa10.46□□□□□ -0.73
CLK3-213ENST00000563842 NOL3O60936 208 aaKnown RBP10.45□□□□□ -0.74
CLK3-213ENST00000563842 ACTL6BO94805 426 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 IGLV2-14P01704 120 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 FCER2P06734 321 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
CLK3-213ENST00000563842 IGLL1P15814 213 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 RPL5P46777 297 aaKnown RBP10.45□□□□□ -0.74
CLK3-213ENST00000563842 TMBIM6P55061 237 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 GNB1P62873 340 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 CATR1Q13166 79 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 DYRK1AQ13627 763 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
CLK3-213ENST00000563842 C19orf54Q5BKX5 351 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 DHRS11Q6UWP2 260 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
CLK3-213ENST00000563842 ZNF491Q8N8L2 437 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 GPX8Q8TED1 209 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 DPF1Q92782 380 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 CCL28Q9NRJ3 127 aa10.45□□□□□ -0.74
CLK3-213ENST00000563842 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms