RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MARCH11A6NNE9 402 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 MSMBP08118 114 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 MMP9P14780 707 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 HOXB4P17483 251 aaPredicted RBP17.82■□□□□ 0.44
LINC01960-201ENST00000563759 RAB32Q13637 225 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 FOXRED2Q8IWF2 684 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 THAP6Q8TBB0 222 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 RPEQ96AT9 228 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 R3HDM4Q96D70 268 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 HTR1DP28221 377 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 IZUMO4Q1ZYL8 232 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 HCP5Q6MZN7 132 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 C11orf87Q6NUJ2 197 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 GPR146Q96CH1 333 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 MMP24Q9Y5R2 645 aa17.82■□□□□ 0.44
LINC01960-201ENST00000563759 H7C2Y5 167 aa17.81■□□□□ 0.44
LINC01960-201ENST00000563759 IL15RAQ13261 267 aa17.81■□□□□ 0.44
LINC01960-201ENST00000563759 TBX15Q96SF7 602 aa17.81■□□□□ 0.44
LINC01960-201ENST00000563759 CACNG5Q9UF02 275 aa17.81■□□□□ 0.44
LINC01960-201ENST00000563759 ITPR2Q14571 2701 aa17.81■□□□□ 0.44
LINC01960-201ENST00000563759 A0A1B0GU03 582 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 ODF3BA8MYP8 253 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 B4DSR2 109 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 RNASEK-C17orf49H0YIS7 233 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 ERVK-16P61578 105 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 TAGLNQ01995 201 aaKnown RBP17.8■□□□□ 0.44
LINC01960-201ENST00000563759 SMCO1Q147U7 214 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 DHRS7BQ6IAN0 325 aaPredicted RBP17.8■□□□□ 0.44
LINC01960-201ENST00000563759 H2BFWTQ7Z2G1 175 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 DMBX1Q8NFW5 382 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 OR4D5Q8NGN0 318 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 OR1S1Q8NH92 325 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 NABP2Q9BQ15 211 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 MBD2Q9UBB5 411 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 LSM5Q9Y4Y9 91 aaKnown RBP17.8■□□□□ 0.44
LINC01960-201ENST00000563759 A0A096LNT2 108 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 A0A1W2PRD5 423 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 A0A1W2PRF3 423 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 A0A1W2PRM7 423 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 H0YJW9 148 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 TXNL1O43396 289 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 SLC25A6P12236 298 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 NQO2P16083 231 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 CEACAM3P40198 252 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 OR5AN1Q8NGI8 311 aa17.8■□□□□ 0.44
LINC01960-201ENST00000563759 CREBBPQ92793 2442 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 CSMD1Q96PZ7 3565 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 LEUTXA8MZ59 168 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 RNF223E7ERA6 249 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 ARPC5O15511 151 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 GAPDHP04406 335 aaKnown RBP17.79■□□□□ 0.44
LINC01960-201ENST00000563759 IGKV1-16P04430 117 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 RRASP10301 218 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 PRSS57Q6UWY2 283 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 SSX9Q7RTT3 188 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 LHX4Q969G2 390 aa17.79■□□□□ 0.44
LINC01960-201ENST00000563759 MBPP02686 304 aaPredicted RBP17.78■□□□□ 0.44
LINC01960-201ENST00000563759 NKX2-1P43699 371 aaPredicted RBP17.78■□□□□ 0.44
LINC01960-201ENST00000563759 RAB13P51153 203 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 Q96MF0 132 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 ZFP57Q9NU63 452 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 DPM3Q9P2X0 92 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 WASHC3Q9Y3C0 194 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 CCDC168Q8NDH2 2452 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 ST8SIA3O43173 380 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 NXPH3O95157 252 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 SLC25A4P12235 298 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 LGALS4P56470 323 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 PAX8Q06710 450 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 LOXL1Q08397 574 aaPredicted RBP17.78■□□□□ 0.44
LINC01960-201ENST00000563759 Q6ZRM9 215 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 PDPNQ86YL7 162 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 VKORC1L1Q8N0U8 176 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 C9orf62Q8N4C0 152 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 HSPB11Q9Y547 144 aa17.78■□□□□ 0.44
LINC01960-201ENST00000563759 IGHV1-3A0A0C4DH29 117 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 HMSDA8MTL9 139 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 RLN2P04090 185 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 TPTE2P1Q5T6R2 138 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 PRSS54Q6PEW0 395 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 ZNF546Q86UE3 836 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 DCUN1D4Q92564 292 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 RBMXL1Q96E39 390 aaKnown RBP17.77■□□□□ 0.43
LINC01960-201ENST00000563759 REG4Q9BYZ8 158 aa17.77■□□□□ 0.43
LINC01960-201ENST00000563759 PRRC2AP48634 2157 aaKnown RBP17.76■□□□□ 0.43
LINC01960-201ENST00000563759 LY6LH3BQJ8 138 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 K7EPK0 472 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 HRASP01112 189 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 P0C879 139 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 MC5RP33032 325 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 UBE2E1P51965 193 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 LHFPL4Q7Z7J7 247 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 MOB3BQ86TA1 216 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 FAM71E2Q8N5Q1 922 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 RHOVQ96L33 236 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 OR5AC2Q9NZP5 309 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 HILPDAQ9Y5L2 63 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 POMT1Q9Y6A1 747 aa17.76■□□□□ 0.43
LINC01960-201ENST00000563759 H0YIZ8 118 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms