RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 LRRTM1Q86UE6 522 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 LAX1Q8IWV1 398 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 JAGN1Q8N5M9 183 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 OR5T1Q8NG75 326 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 OR2K2Q8NGT1 345 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 NEK7Q8TDX7 302 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 ABHD5Q8WTS1 349 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 WDR89Q96FK6 387 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-204ENST00000563739 Q96M66 194 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 TINAGL1Q9GZM7 467 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-204ENST00000563739 METTL1Q9UBP6 276 aaKnown RBP7.74□□□□□ -1.17
SF3B3-204ENST00000563739 UBE2QL1A1L167 161 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 CXorf65A6NEN9 183 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 OR11H12B2RN74 326 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 TPPPO94811 219 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 OR2A4O95047 310 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 CALRP27797 417 aaKnown RBP7.73□□□□□ -1.17
SF3B3-204ENST00000563739 VBP1P61758 197 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 NCS1P62166 190 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 LSM3P62310 102 aaKnown RBP7.73□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF45Q02386 682 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 TNFRSF9Q07011 255 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 CDH26Q8IXH8 852 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF383Q8NA42 475 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 BVESQ8NE79 360 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 GRPEL2Q8TAA5 225 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 DYNC2LI1Q8TCX1 351 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 MRPS24Q96EL2 167 aaKnown RBP7.73□□□□□ -1.17
SF3B3-204ENST00000563739 C5orf30Q96GV9 206 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 ABHD14BQ96IU4 210 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 UQCC2Q9BRT2 126 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 BANF2Q9H503 90 aa7.73□□□□□ -1.17
SF3B3-204ENST00000563739 PEF1Q9UBV8 284 aaKnown RBP7.73□□□□□ -1.17
SF3B3-204ENST00000563739 TRDV1A0A1B0GX56 115 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 OR5H14A6NHG9 310 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 FAM90A23PA8MXZ1 464 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
SF3B3-204ENST00000563739 GTF2F2P13984 249 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 SRMP19623 302 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 GALP22466 123 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 TMEM267Q0VDI3 215 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-204ENST00000563739 MOGAT2Q3SYC2 334 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 TIMM50Q3ZCQ8 353 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 GLT8D1Q68CQ7 371 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 LGALS9CQ6DKI2 356 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 AWAT2Q6E213 333 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF880Q6PDB4 577 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 TRAT1Q6PIZ9 186 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 LINC00299Q6ZSB3 139 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 LYG2Q86SG7 212 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF554Q86TJ5 538 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 CACNG8Q8WXS5 425 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 S100A13Q99584 98 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 GFI1Q99684 422 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 SULT4A1Q9BR01 284 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 OR51E2Q9H255 320 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF230Q9UIE0 474 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-204ENST00000563739 PEX16Q9Y5Y5 336 aa7.72□□□□□ -1.17
SF3B3-204ENST00000563739 C13orf42A0A1B0GVH6 325 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 MCRIP1C9JLW8 97 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 ZNF780AO75290 641 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-204ENST00000563739 RBBP9O75884 186 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 SPDEFO95238 335 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 MYL9P24844 172 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 SERPINB10P48595 397 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 FXYD3Q14802 87 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 C22orf42Q6IC83 251 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 GLIPR1L1Q6UWM5 242 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 DRAXINQ8NBI3 349 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-204ENST00000563739 ADAD2Q8NCV1 583 aaKnown RBP7.71□□□□□ -1.18
SF3B3-204ENST00000563739 KCNG3Q8TAE7 436 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 DCSTAMPQ9H295 470 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 PLGRKTQ9HBL7 147 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 SPACA1Q9HBV2 294 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 OR1A1Q9P1Q5 309 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 RNF150Q9ULK6 438 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 WASHC3Q9Y3C0 194 aa7.71□□□□□ -1.18
SF3B3-204ENST00000563739 TRAV1-2A0A0B4J238 106 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 LOC100506127A0A0U1RQW1 187 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 C2orf70A6NJV1 201 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 FAM90A7PA6NKC0 464 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 CA11O75493 328 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 CNIH1O95406 144 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 NAPSAO96009 420 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 UBBP0CG47 229 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 CD37P11049 281 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 MGMTP16455 207 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 FGF9P31371 208 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-204ENST00000563739 TGFBR1P36897 503 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 GPR176Q14439 515 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 PLGLAQ15195 96 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 RPEL1Q2QD12 228 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 C1orf100Q5SVJ3 147 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 C19orf35Q6ZS72 473 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 OR2AK2Q8NG84 335 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms