RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 RAB2BQ8WUD1 216 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 HARBI1Q96MB7 349 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 CMTM3Q96MX0 182 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 P2RX4Q99571 388 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 MRPS7Q9Y2R9 242 aaKnown RBP12.17□□□□□ -0.46
AC009088.3-201ENST00000563605 IGKV1D-13A0A0B4J2D9 117 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 LINC00473A8K010 186 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 HPGDSO60760 199 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 IGKV1-13P0DP09 117 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 SLC6A1P30531 599 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 LGALS7P47929 136 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 RAB9AP51151 201 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 TMEM267Q0VDI3 215 aaPredicted RBP12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 FXYD3Q14802 87 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 OR2B11Q5JQS5 317 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 ZNF645Q8N7E2 425 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 MINDY2Q8NBR6 621 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 ADTRPQ96IZ2 230 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 DCUN1D5Q9BTE7 237 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 GNB4Q9HAV0 340 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 NECAP2Q9NVZ3 263 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
AC009088.3-201ENST00000563605 SRRM4A7MD48 611 aaKnown RBP12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 SOX15O60248 233 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 SPDEFO95238 335 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 CRYZL1O95825 349 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 FCGR2CP31995 323 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 PRSS3P35030 304 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 TMBIM6P55061 237 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 TAGLNQ01995 201 aaKnown RBP12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 KIAA0141Q14154 515 aaPredicted RBP12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 ACTBL2Q562R1 376 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 ZNF491Q8N8L2 437 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 VSIG4Q9Y279 399 aa12.15□□□□□ -0.46
AC009088.3-201ENST00000563605 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 FCGR3BO75015 233 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 SLC22A5O76082 557 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 RRASP10301 218 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 ELK1P19419 428 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 AADACP22760 399 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 RPL30P62888 115 aaKnown RBP12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 SPCS2Q15005 226 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 SNX29P2Q8IUI4 249 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 OR11H1Q8NG94 326 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 SECTM1Q8WVN6 248 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 DDB2Q92466 427 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 ARPC1AQ92747 370 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 UBE2E2Q96LR5 201 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 GPHA2Q96T91 129 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 RBMX2Q9Y388 322 aaKnown RBP12.14□□□□□ -0.47
AC009088.3-201ENST00000563605 RGS5O15539 181 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 IGLV2-14P01704 120 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 CRYGBP07316 175 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 TAS2R46P59540 309 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 KRTAP10-11P60412 298 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 CDK10Q15131 360 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 TCTEX1D2Q8WW35 142 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 SNAPC3Q92966 411 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 CCL28Q9NRJ3 127 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 EXTL2Q9UBQ6 330 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 PRELID3BQ9Y3B1 194 aa12.13□□□□□ -0.47
AC009088.3-201ENST00000563605 CCDC160A6NGH7 325 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 TNFSF12O43508 249 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 IGHV3-11P01762 117 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 APELAP0DMC3 54 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 CD40LGP29965 261 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 CRIP2P52943 208 aaPredicted RBP12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 FXYD4P59646 89 aa12.12□□□□□ -0.47
AC009088.3-201ENST00000563605 HERV-K104P61576 105 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms