RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PLXDC1Q8IUK5 500 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 PPDPFLQ8WWR9 84 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 MRGPRFQ96AM1 343 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 NPCDR1Q9BY65 106 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 AICDAQ9GZX7 198 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 OBP2BQ9NPH6 170 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 TMEM56-RWDD3S4R434 201 aa5.4□□□□□ -1.54
CLK3-212ENST00000563418 A0A1W2PPC4 97 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 A0A1W2PQM1 296 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 TMEM52BQ4KMG9 183 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 EAF1Q96JC9 268 aaPredicted RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 TSSC4Q9Y5U2 329 aaPredicted RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 OR2J3O76001 311 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 ANOS1P23352 680 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 HHEXQ03014 270 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 CST6Q15828 149 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 ATG4DQ86TL0 474 aaPredicted RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 ZADH2Q8N4Q0 377 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 FGF21Q9NSA1 209 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 LTBP4Q8N2S1 1624 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 GPR6P46095 362 aaPredicted RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 C9orf50Q5SZB4 431 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 FAM19A2Q8N3H0 131 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 APOBEC4Q8WW27 367 aaKnown RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 C18orf12Q96KH6 178 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 ZFAND5O76080 213 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 C1QCP02747 245 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 MFAP4P55083 255 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 ST6GALNAC6Q969X2 333 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 PAAF1Q9BRP4 392 aa5.4□□□□□ -1.55
CLK3-212ENST00000563418 SF3B5Q9BWJ5 86 aaKnown RBP5.4□□□□□ -1.55
CLK3-212ENST00000563418 PRSS38A1L453 326 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 CD160O95971 181 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 OPRK1P41145 380 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 UCP2P55851 309 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 SP7Q8TDD2 431 aaPredicted RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 WNT16Q9UBV4 365 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 PF4V1P10720 104 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 TBC1D28Q2M2D7 210 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 AAED1Q7RTV5 226 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 BOD1L2Q8IYS8 172 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 TPRX1Q8N7U7 411 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 RDH5Q92781 318 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 E9PQ18 207 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 MRPL33O75394 65 aaKnown RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 CRYBA2P53672 197 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 ZNF841Q6ZN19 808 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 SIGLEC12Q96PQ1 595 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 CASP8AP2Q9UKL3 1982 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 H0YIG0 161 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 PSG2P11465 335 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 TBR1Q16650 682 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 BHLHA15Q7RTS1 189 aaPredicted RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 C12orf76Q8N812 135 aaPredicted RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 C16orf52Q8NHV5 167 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 NHP2Q9NX24 153 aaKnown RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 NEUROG3Q9Y4Z2 214 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 TMEM256Q8N2U0 113 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 J3KT08 172 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 GAS1P54826 345 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 ZNF793Q6ZN11 406 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 FAM231BA6NCW3 169 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 KIR2DL1P43626 348 aaPredicted RBP5.39□□□□□ -1.55
CLK3-212ENST00000563418 CCL20P78556 96 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 ZNF502Q8TBZ5 544 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 PRNDQ9UKY0 176 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 A0A1W2PQU0 124 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 ALG1L2C9J202 215 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 SIVA1O15304 175 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 DEFB125Q8N687 156 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 TMEM101Q96IK0 257 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 CCL28Q9NRJ3 127 aa5.39□□□□□ -1.55
CLK3-212ENST00000563418 A0A1W2PPM0 123 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 G3V4G9 280 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 ATXN7O15265 892 aaPredicted RBP5.38□□□□□ -1.55
CLK3-212ENST00000563418 MLNRO43193 412 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 HOXA3O43365 443 aaPredicted RBP5.38□□□□□ -1.55
CLK3-212ENST00000563418 CKS2P33552 79 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 ASIPP42127 132 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 WBP2Q969T9 261 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 NGBQ9NPG2 151 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 CRYBA4P53673 196 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 STARD5Q9NSY2 213 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 UFC1Q9Y3C8 167 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 WNT6Q9Y6F9 365 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 SYS1-DBNDD2H3BUS1 97 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 CXorf66Q5JRM2 361 aaPredicted RBP5.38□□□□□ -1.55
CLK3-212ENST00000563418 OR10J6PQ8NGY7 276 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 FAM174AQ8TBP5 190 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 HILPDAQ9Y5L2 63 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 NFAM1Q8NET5 270 aaPredicted RBP5.38□□□□□ -1.55
CLK3-212ENST00000563418 APOOQ9BUR5 198 aa5.38□□□□□ -1.55
CLK3-212ENST00000563418 F11P03951 625 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms