RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 NIPBLQ6KC79 2804 aaeCLIP15.03■□□□□ -0
RAB40C-207ENST00000563109 NCBP2LA6PVI3 153 aaKnown RBP15.03■□□□□ -0
RAB40C-207ENST00000563109 LYRM1O43325 122 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 CRYZL1O95825 349 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 IGKV1-16P04430 117 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 PI3P19957 117 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 PIGPP57054 158 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 RPS16P62249 146 aaKnown RBP15.03■□□□□ -0
RAB40C-207ENST00000563109 TBC1D26Q86UD7 250 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 SPAG16Q8N0X2 631 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 CD300LFQ8TDQ1 290 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 HARBI1Q96MB7 349 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 TSNAXQ99598 290 aaKnown RBP15.03■□□□□ -0
RAB40C-207ENST00000563109 CUBNO60494 3623 aa15.03■□□□□ -0
RAB40C-207ENST00000563109 SHOXO15266 292 aa15.02■□□□□ -0
RAB40C-207ENST00000563109 NBR2O15453 112 aa15.02■□□□□ -0
RAB40C-207ENST00000563109 FGF16O43320 207 aa15.02■□□□□ -0
RAB40C-207ENST00000563109 RBMS2Q15434 407 aaKnown RBP15.02■□□□□ -0
RAB40C-207ENST00000563109 MZT2BQ6NZ67 158 aa15.02■□□□□ -0
RAB40C-207ENST00000563109 TCTEX1D1Q8N7M0 179 aa15.02■□□□□ -0
RAB40C-207ENST00000563109 RANBP3Q9H6Z4 567 aaPredicted RBP15.02■□□□□ -0
RAB40C-207ENST00000563109 PLA2G10O15496 165 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 RBFOX2O43251 390 aaKnown RBP eCLIP15.01□□□□□ -0.012e-11■■□□□ 12.3
RAB40C-207ENST00000563109 PEX14O75381 377 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 SPDEFO95238 335 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 F2RP25116 425 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 CCR6P51684 374 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 OSR1Q8TAX0 266 aaPredicted RBP15.01□□□□□ -0.01
RAB40C-207ENST00000563109 RBMXL1Q96E39 390 aaKnown RBP15.01□□□□□ -0.01
RAB40C-207ENST00000563109 RASL11BQ9BPW5 248 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 GPR132Q9UNW8 380 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 VSIG4Q9Y279 399 aa15.01□□□□□ -0.01
RAB40C-207ENST00000563109 MPPED1O15442 326 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 LGALS7P47929 136 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 DEFA1P59665 94 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 DEFA3P59666 94 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 ASAH1Q13510 395 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 PLGLAQ15195 96 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 ARSJQ5FYB0 599 aaPredicted RBP15□□□□□ -0.01
RAB40C-207ENST00000563109 C5orf56Q8N8D9 126 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 C5orf66Q9H5L9 145 aa15□□□□□ -0.01
RAB40C-207ENST00000563109 TEX13DA0A0J9YY54 714 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-207ENST00000563109 NDUFB6O95139 128 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 CNTFRP26992 372 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 BTCP35070 178 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 F2RL1P55085 397 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 VMA21Q3ZAQ7 101 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 TMED4Q7Z7H5 227 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-207ENST00000563109 Q8N9W7 124 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 NPBQ8NG41 125 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 RITA1Q96K30 269 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 AIFM2Q9BRQ8 373 aa14.99□□□□□ -0.01
RAB40C-207ENST00000563109 RTBDNQ9BSG5 229 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-207ENST00000563109 H0Y980 276 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 RRHO14718 337 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 RAMP3O60896 148 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 B3GALNT1O75752 331 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 NDUFA3O95167 84 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 HPRT1P00492 218 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 HRASP01112 189 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 RAG2P55895 527 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 PSG5Q15238 335 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 C9orf152Q5JTZ5 239 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 TMEM158Q8WZ71 300 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 NAA60Q9H7X0 242 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 PLSCR3Q9NRY6 295 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 FAM212BQ9NTI7 297 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-207ENST00000563109 COMMD9Q9P000 198 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 METTL1Q9UBP6 276 aaKnown RBP14.98□□□□□ -0.01
RAB40C-207ENST00000563109 TBC1D24Q9ULP9 559 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 NF1P21359 2839 aa14.98□□□□□ -0.01
RAB40C-207ENST00000563109 SETD2Q9BYW2 2564 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-207ENST00000563109 C3orf85A0A1B0GTC6 90 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 SLC25A17O43808 307 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 NDUFA7O95182 113 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 SERPINE2P07093 398 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 HKR1P10072 659 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 TAS2R31P59538 309 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 C5orf64Q2M2E5 130 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 SGPP2Q8IWX5 399 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 CENPSQ8N2Z9 138 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 FAM71E2Q8N5Q1 922 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 OR4F5Q8NH21 305 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 PLEKHA2Q9HB19 425 aa14.97□□□□□ -0.01
RAB40C-207ENST00000563109 FAM240BA0A1B0GVZ2 78 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 CRYM-AS1A6NIL9 109 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 S1PR2O95136 353 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 AKR1C4P17516 323 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 LPAR6P43657 344 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 BRWD1-AS2P59051 145 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 UBE2KP61086 200 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 ERVK-16P61578 105 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 IFITM3Q01628 133 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 KRTAP24-1Q3LI83 254 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 Q6ZSV7 163 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 ADAD2Q8NCV1 583 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms