RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 EHFQ9NZC4 300 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 PRELID3BQ9Y3B1 194 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 A0A1W2PRX2 142 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 H3BMQ9 156 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 SHOXO15266 292 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 IGHG4P01861 327 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 ELANEP08246 267 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
CDT1-202ENST00000562747 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
CDT1-202ENST00000562747 CX3CL1P78423 397 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 FOXE3Q13461 319 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 EIF4EBP1Q13541 118 aaPredicted RBP12.98□□□□□ -0.33
CDT1-202ENST00000562747 DYRK1AQ13627 763 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 ZNF66Q6ZN08 573 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 KCTD9Q7L273 389 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 ZBTB34Q8NCN2 500 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 OR5H2Q8NGV7 314 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 C15orf40Q8WUR7 153 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 SECTM1Q8WVN6 248 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 EXTL2Q9UBQ6 330 aa12.98□□□□□ -0.33
CDT1-202ENST00000562747 FCN1O00602 326 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 RGS5O15539 181 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 SLC25A17O43808 307 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 PF4V1P10720 104 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 SLC6A1P30531 599 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 RCVRNP35243 200 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
CDT1-202ENST00000562747 PPP1R27Q86WC6 154 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 OSR1Q8TAX0 266 aaPredicted RBP12.97□□□□□ -0.33
CDT1-202ENST00000562747 SLC5A7Q9GZV3 580 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 MIXL1Q9H2W2 232 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 COL7A1Q02388 2944 aa12.97□□□□□ -0.33
CDT1-202ENST00000562747 TRAV41A0A0B4J266 112 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 FCGR3BO75015 233 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CRYZL1O95825 349 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CA2P00918 260 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 PMP2P02689 132 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CRYGBP07316 175 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 PPIFP30405 207 aaKnown RBP12.96□□□□□ -0.33
CDT1-202ENST00000562747 RFX2P48378 723 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 FXYD4P59646 89 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 HERV-K104P61576 105 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 RPL30P62888 115 aaKnown RBP12.96□□□□□ -0.33
CDT1-202ENST00000562747 NDPQ00604 133 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 FOXB2Q5VYV0 432 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 LYSMD2Q8IV50 215 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 MFSD4AQ8N468 514 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 TCTEX1D1Q8N7M0 179 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 TEX45Q8NA69 505 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 BORCS5Q969J3 196 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CLCC1Q96S66 551 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CCL28Q9NRJ3 127 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.33
CDT1-202ENST00000562747 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
CDT1-202ENST00000562747 G3V318 75 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 CTDSP2O14595 271 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 PSMB8P28062 276 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 HLA-DMAP28067 261 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 HRH1P35367 487 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 UBE2KP61086 200 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 TMEM267Q0VDI3 215 aaPredicted RBP12.95□□□□□ -0.34
CDT1-202ENST00000562747 VMA21Q3ZAQ7 101 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 LAX1Q8IWV1 398 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 OR4S2Q8NH73 311 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 TCTEX1D2Q8WW35 142 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 MOB3AQ96BX8 217 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 ZNF2Q9BSG1 426 aaPredicted RBP12.95□□□□□ -0.34
CDT1-202ENST00000562747 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 FBXO7Q9Y3I1 522 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
CDT1-202ENST00000562747 IGLV1-40P01703 118 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 RPLP1P05386 114 aaKnown RBP12.94□□□□□ -0.34
CDT1-202ENST00000562747 EGR2P11161 476 aaPredicted RBP12.94□□□□□ -0.34
CDT1-202ENST00000562747 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 ACTBL2Q562R1 376 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 C11orf87Q6NUJ2 197 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 ABHD5Q8WTS1 349 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 ARPC1AQ92747 370 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 ABHD1Q96SE0 405 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 DCUN1D5Q9BTE7 237 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 SLIRPQ9GZT3 109 aaKnown RBP12.94□□□□□ -0.34
CDT1-202ENST00000562747 RABL2AQ9UBK7 228 aaPredicted RBP12.94□□□□□ -0.34
CDT1-202ENST00000562747 RABL2BQ9UNT1 228 aa12.94□□□□□ -0.34
CDT1-202ENST00000562747 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 K7EIL1 84 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 PF4P02776 101 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 IGLL1P15814 213 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
CDT1-202ENST00000562747 MRPS10P82664 201 aaKnown RBP12.93□□□□□ -0.34
CDT1-202ENST00000562747 CATR1Q13166 79 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms