RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 TMEM65Q6PI78 240 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 MBD6Q96DN6 1003 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 PCGF1Q9BSM1 259 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 UNKLQ9H9P5 680 aaKnown RBP11.61□□□□□ -0.55
CNN2-204ENST00000562075 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 POMT1Q9Y6A1 747 aa11.61□□□□□ -0.55
CNN2-204ENST00000562075 ARHGAP32A7KAX9 2087 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 MARCH11A6NNE9 402 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 H0YIZ8 118 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 H0YJW9 148 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 H7C2Y5 167 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 K7EPK0 472 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 P0C879 139 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 NQO2P16083 231 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
CNN2-204ENST00000562075 HTR1DP28221 377 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 NKX2-1P43699 371 aaPredicted RBP11.6□□□□□ -0.55
CNN2-204ENST00000562075 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 LGALSLQ3ZCW2 172 aaPredicted RBP11.6□□□□□ -0.55
CNN2-204ENST00000562075 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 FAM71E2Q8N5Q1 922 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 DMBX1Q8NFW5 382 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 RPEQ96AT9 228 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 MFFQ9GZY8 342 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 PLSCR3Q9NRY6 295 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 OR5AC2Q9NZP5 309 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
CNN2-204ENST00000562075 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 TXNL1O43396 289 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 PITX3O75364 302 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 DEDDO75618 318 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 NXPH3O95157 252 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 HRASP01112 189 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
CNN2-204ENST00000562075 LYL1P12980 280 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 MMP9P14780 707 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 CXCL2P19875 107 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 C4BPBP20851 252 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 NUP62P37198 522 aaPredicted RBP11.59□□□□□ -0.55
CNN2-204ENST00000562075 CEACAM3P40198 252 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 CXorf66Q5JRM2 361 aaPredicted RBP11.59□□□□□ -0.55
CNN2-204ENST00000562075 Q5PR19 223 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 Q6ZRM9 215 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 SSX9Q7RTT3 188 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
CNN2-204ENST00000562075 OR5AN1Q8NGI8 311 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 COA4Q9NYJ1 87 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 RCL1Q9Y2P8 373 aaKnown RBP11.59□□□□□ -0.55
CNN2-204ENST00000562075 WASHC3Q9Y3C0 194 aa11.59□□□□□ -0.55
CNN2-204ENST00000562075 SPG11Q96JI7 2443 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 A0A1W2PRD5 423 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 A0A1W2PRF3 423 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 A0A1W2PRM7 423 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 LEUTXA8MZ59 168 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 RNASEK-C17orf49H0YIS7 233 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 LY6LH3BQJ8 138 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 WRBO00258 174 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 MSMBP08118 114 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 MC5RP33032 325 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 RAB13P51153 203 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 AP2S1P53680 142 aaPredicted RBP11.58□□□□□ -0.56
CNN2-204ENST00000562075 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 MOB3BQ86TA1 216 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 VKORC1L1Q8N0U8 176 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.58□□□□□ -0.56
CNN2-204ENST00000562075 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
CNN2-204ENST00000562075 FBN2P35556 2912 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 IGHV1-3A0A0C4DH29 117 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 FAM90A9PA6NNJ1 464 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 E5RGE8 158 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 SHOXO15266 292 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 SSSCA1O60232 199 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 TSC22D2O75157 780 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
CNN2-204ENST00000562075 OR2F2O95006 317 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 PVALBP20472 110 aaPredicted RBP11.57□□□□□ -0.56
CNN2-204ENST00000562075 LGALS4P56470 323 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
CNN2-204ENST00000562075 VAMP2P63027 116 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 ID3Q02535 119 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 PAX8Q06710 450 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 OR2F1Q13607 317 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 MIDNQ504T8 468 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 ACOT7LQ6ZUV0 252 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 TMUB2Q71RG4 321 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 OSR1Q8TAX0 266 aaPredicted RBP11.57□□□□□ -0.56
CNN2-204ENST00000562075 LHX4Q969G2 390 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
CNN2-204ENST00000562075 RHOVQ96L33 236 aa11.57□□□□□ -0.56
CNN2-204ENST00000562075 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms