RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SVILO95425 2214 aa8.77□□□□□ -1
GTF3C1-202ENST00000561623 C17orf51A8MQB3 221 aa8.77□□□□□ -1
GTF3C1-202ENST00000561623 ARF6P62330 175 aa8.77□□□□□ -1
GTF3C1-202ENST00000561623 UNQ6494/PRO21346Q6UXR6 183 aa8.77□□□□□ -1
GTF3C1-202ENST00000561623 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1
GTF3C1-202ENST00000561623 COL18A1P39060 1754 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 CKAP5Q14008 2032 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 A0A0J9YW62 118 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 SLC17A3O00476 420 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 SRP19P09132 144 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 TEX30Q5JUR7 227 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM136Q6ZRR5 245 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 OR8G5Q8NG78 346 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 SLC25A28Q96A46 364 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 C7orf71A4D174 169 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 GLRX2Q9NS18 164 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 RPRMQ9NS64 109 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 PRDX2P32119 198 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 RBPMS2Q6ZRY4 209 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 SPRED2Q7Z698 418 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 CALHM1Q8IU99 346 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 VKORC1L1Q8N0U8 176 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 Q96M66 194 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 DICER1Q9UPY3 1922 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 MPDU1O75352 247 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 S1PR2O95136 353 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 CELA2AP08217 269 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF735P0CB33 412 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 LGALS7P47929 136 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 TBL2Q9Y4P3 447 aaKnown RBP8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM14DPA8MWL7 114 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 SLC25A47Q6Q0C1 308 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF826PQ6ZT77 177 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM210A6NLX4 147 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 TSPAN2O60636 221 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 NPIPB7O75200 414 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 PRDM14Q9GZV8 571 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 NPBWR2P48146 333 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 Q71RC1 249 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 MRPL13Q9BYD1 178 aaKnown RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 IGHV3-72A0A0B4J1Y9 119 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 WFDC3Q8IUB2 231 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 CGB1A6NKQ9 187 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 CTSBP07858 339 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 ERGP11308 486 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 CEACAM3P40198 252 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 FOXA3P55318 350 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 SMIM8Q96KF7 97 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 TXNDC17Q9BRA2 123 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 J3QKU1 62 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 GPR6P46095 362 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 ABHD12Q8N2K0 398 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 NFAM1Q8NET5 270 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 SPSB4Q96A44 273 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 TMUB1Q9BVT8 246 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 PILRAQ9UKJ1 303 aa8.76□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 A6NJY4 79 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 CENPWQ5EE01 88 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 LOXL4Q96JB6 756 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF324O75467 553 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 RTN4RQ9BZR6 473 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 IGHV3OR16-12A0A075B7B8 117 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 NKX2-8O15522 239 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 GFRA1P56159 465 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 SRSF12Q8WXF0 261 aaKnown RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 GALNT14Q96FL9 552 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 MCM3APO60318 1980 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 FGF5P12034 268 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 TTC32Q5I0X7 151 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 ASPHD2Q6ICH7 369 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 C1QL2Q7Z5L3 287 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 RTBDNQ9BSG5 229 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 DLL3Q9NYJ7 618 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 TRPM6Q9BX84 2022 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 TRIP12Q14669 1992 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 FAM19A2Q8N3H0 131 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 SMRP1Q8NCR6 262 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 LEAP2Q969E1 77 aa8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 PEF1Q9UBV8 284 aaKnown RBP8.75□□□□□ -1.01
GTF3C1-202ENST00000561623 A6NNC1 897 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF815PA8K554 130 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 TNFSF10P50591 281 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 EMP1P54849 157 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF658BQ4V348 819 aaPredicted RBP8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 KLK15Q9H2R5 256 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms