RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 LINC00473A8K010 186 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 CA2P00918 260 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 RRASP10301 218 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 KRTAP10-11P60412 298 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 TMEM267Q0VDI3 215 aaPredicted RBP16.06■□□□□ 0.16
TPM1-232ENST00000561425 SPCS2Q15005 226 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 PLGLAQ15195 96 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 MRGPRG-AS1Q2M3A8 158 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 DEFB136Q30KP8 78 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 TMEM65Q6PI78 240 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 PPP1R27Q86WC6 154 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 HOGA1Q86XE5 327 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 BVESQ8NE79 360 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 AUNIPQ9H7T9 357 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 TPSG1Q9NRR2 321 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 FOXA2Q9Y261 457 aaPredicted RBP16.06■□□□□ 0.16
TPM1-232ENST00000561425 VSIG4Q9Y279 399 aa16.06■□□□□ 0.16
TPM1-232ENST00000561425 ARPC1BO15143 372 aaKnown RBP16.05■□□□□ 0.16
TPM1-232ENST00000561425 SLC25A17O43808 307 aa16.05■□□□□ 0.16
TPM1-232ENST00000561425 NFYAP23511 347 aaPredicted RBP16.05■□□□□ 0.16
TPM1-232ENST00000561425 EIF4EBP1Q13541 118 aaPredicted RBP16.05■□□□□ 0.16
TPM1-232ENST00000561425 ZNF645Q8N7E2 425 aa16.05■□□□□ 0.16
TPM1-232ENST00000561425 OR5M8Q8NGP6 311 aa16.05■□□□□ 0.16
TPM1-232ENST00000561425 DGCR14Q96DF8 476 aaKnown RBP16.05■□□□□ 0.16
TPM1-232ENST00000561425 GNB4Q9HAV0 340 aa16.05■□□□□ 0.16
TPM1-232ENST00000561425 DIABLOQ9NR28 239 aa16.05■□□□□ 0.16
TPM1-232ENST00000561425 RBM7Q9Y580 266 aaKnown RBP16.05■□□□□ 0.16
TPM1-232ENST00000561425 XRCC3O43542 346 aa16.04■□□□□ 0.16
TPM1-232ENST00000561425 SLC22A5O76082 557 aa16.04■□□□□ 0.16
TPM1-232ENST00000561425 ASPHD1Q5U4P2 390 aa16.04■□□□□ 0.16
TPM1-232ENST00000561425 CLCC1Q96S66 551 aa16.04■□□□□ 0.16
TPM1-232ENST00000561425 RBMX2Q9Y388 322 aaKnown RBP16.04■□□□□ 0.16
TPM1-232ENST00000561425 IGKV1D-13A0A0B4J2D9 117 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 A0A1W2PN81 502 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 A6NHS1 94 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 IGKV1-13P0DP09 117 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 CHRNA7P36544 502 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 FXYD3Q14802 87 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 RTL8BQ17RB0 113 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 ECSCRQ19T08 205 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 PYHIN1Q6K0P9 492 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 OVCH2Q7RTZ1 564 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 GVQW1Q8N7I0 195 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 TEX45Q8NA69 505 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 LFNGQ8NES3 379 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 BEST4Q8NFU0 473 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 OR11H1Q8NG94 326 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 SLC25A46Q96AG3 418 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 HARBI1Q96MB7 349 aa16.03■□□□□ 0.16
TPM1-232ENST00000561425 FAM103A1Q9BTL3 118 aaKnown RBP16.03■□□□□ 0.16
TPM1-232ENST00000561425 BRI3O95415 125 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 RORCP51449 518 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 PJVKQ0ZLH3 352 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 MSMO1Q15800 293 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 UNQ5815/PRO19632Q6UWF5 114 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 OSR1Q8TAX0 266 aaPredicted RBP16.02■□□□□ 0.16
TPM1-232ENST00000561425 ARPC1AQ92747 370 aa16.02■□□□□ 0.16
TPM1-232ENST00000561425 S100A16Q96FQ6 103 aaKnown RBP16.02■□□□□ 0.16
TPM1-232ENST00000561425 TGP01266 2768 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 K7EIL1 84 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 SHOXO15266 292 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 HOXD3P31249 432 aaPredicted RBP16.01■□□□□ 0.15
TPM1-232ENST00000561425 UBE2KP61086 200 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 GNB1P62873 340 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 RPL30P62888 115 aaKnown RBP16.01■□□□□ 0.15
TPM1-232ENST00000561425 ACTBL2Q562R1 376 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 UBE2NLQ5JXB2 153 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 OR1N2Q8NGR9 330 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 MRAPQ8TCY5 172 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 KCTD12Q96CX2 325 aaKnown RBP16.01■□□□□ 0.15
TPM1-232ENST00000561425 TMEM68Q96MH6 324 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 CCDC59Q9P031 241 aaKnown RBP16.01■□□□□ 0.15
TPM1-232ENST00000561425 ANAPC10Q9UM13 185 aa16.01■□□□□ 0.15
TPM1-232ENST00000561425 PTHLHP12272 177 aa16■□□□□ 0.15
TPM1-232ENST00000561425 CBX5P45973 191 aa16■□□□□ 0.15
TPM1-232ENST00000561425 BRWD1-AS2P59051 145 aa16■□□□□ 0.15
TPM1-232ENST00000561425 CBX3Q13185 183 aa16■□□□□ 0.15
TPM1-232ENST00000561425 DYNC2LI1Q8TCX1 351 aa16■□□□□ 0.15
TPM1-232ENST00000561425 AP3S1Q92572 193 aa16■□□□□ 0.15
TPM1-232ENST00000561425 SNAPC3Q92966 411 aa16■□□□□ 0.15
TPM1-232ENST00000561425 RHOVQ96L33 236 aa16■□□□□ 0.15
TPM1-232ENST00000561425 CMTM3Q96MX0 182 aa16■□□□□ 0.15
TPM1-232ENST00000561425 A3GALT2U3KPV4 340 aa16■□□□□ 0.15
TPM1-232ENST00000561425 H3BUA1 57 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 J3QRK9 145 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 CRYZL1O95825 349 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 ZNF182P17025 639 aaPredicted RBP15.99■□□□□ 0.15
TPM1-232ENST00000561425 ZNF616Q08AN1 781 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 HSD17B10Q99714 261 aaKnown RBP15.99■□□□□ 0.15
TPM1-232ENST00000561425 DCUN1D5Q9BTE7 237 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 SLA2Q9H6Q3 261 aa15.99■□□□□ 0.15
TPM1-232ENST00000561425 WI2-2373I1.2A0A1W2PRP0 233 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 LGALS1P09382 135 aaKnown RBP15.98■□□□□ 0.15
TPM1-232ENST00000561425 OR8U8P0C7N1 319 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 NAT1P18440 290 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 PRSS8Q16651 343 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 SAMD12Q8N8I0 201 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 OR5AP2Q8NGF4 316 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 ABHD5Q8WTS1 349 aa15.98■□□□□ 0.15
TPM1-232ENST00000561425 CASTOR1Q8WTX7 329 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms