RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 IFNA21P01568 189 aa2.56□□□□□ -2
SPG11-225ENST00000561391 IGHV4-59P01825 116 aa2.56□□□□□ -2
SPG11-225ENST00000561391 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 CD28P10747 220 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SLC2A1P11166 492 aa2.56□□□□□ -2
SPG11-225ENST00000561391 B4GALT1P15291 398 aa2.56□□□□□ -2
SPG11-225ENST00000561391 MGMTP16455 207 aa2.56□□□□□ -2
SPG11-225ENST00000561391 GNB3P16520 340 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ZNF32P17041 273 aa2.56□□□□□ -2
SPG11-225ENST00000561391 FUT3P21217 361 aa2.56□□□□□ -2
SPG11-225ENST00000561391 MT3P25713 68 aa2.56□□□□□ -2
SPG11-225ENST00000561391 S100GP29377 79 aa2.56□□□□□ -2
SPG11-225ENST00000561391 BLVRBP30043 206 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 CD80P33681 288 aa2.56□□□□□ -2
SPG11-225ENST00000561391 APLNRP35414 380 aa2.56□□□□□ -2
SPG11-225ENST00000561391 NKX2-5P52952 324 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 ARPC4P59998 168 aa2.56□□□□□ -2
SPG11-225ENST00000561391 UBE2NP61088 152 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 EIF5AP63241 154 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 SRPXP78539 464 aa2.56□□□□□ -2
SPG11-225ENST00000561391 RPL24P83731 157 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 FAM3AP98173 230 aa2.56□□□□□ -2
SPG11-225ENST00000561391 DHODHQ02127 395 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ARL16Q0P5N6 197 aa2.56□□□□□ -2
SPG11-225ENST00000561391 DHRS2Q13268 280 aa2.56□□□□□ -2
SPG11-225ENST00000561391 UNC119Q13432 240 aa2.56□□□□□ -2
SPG11-225ENST00000561391 OR2F1Q13607 317 aa2.56□□□□□ -2
SPG11-225ENST00000561391 RBM39Q14498 530 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 GABRA6Q16445 453 aa2.56□□□□□ -2
SPG11-225ENST00000561391 RSPO1Q2MKA7 263 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 CEACAM21Q3KPI0 293 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SCGB2B2Q4G0G5 96 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SLC22A6Q4U2R8 563 aa2.56□□□□□ -2
SPG11-225ENST00000561391 PABPC1L2AQ5JQF8 200 aa2.56□□□□□ -2
SPG11-225ENST00000561391 NHLRC3Q5JS37 347 aa2.56□□□□□ -2
SPG11-225ENST00000561391 PHYHD1Q5SRE7 291 aa2.56□□□□□ -2
SPG11-225ENST00000561391 TSPO2Q5TGU0 170 aa2.56□□□□□ -2
SPG11-225ENST00000561391 C9orf135Q5VTT2 229 aa2.56□□□□□ -2
SPG11-225ENST00000561391 FBXW9Q5XUX1 488 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ELP2Q6IA86 826 aa2.56□□□□□ -2
SPG11-225ENST00000561391 EIF5AL1Q6IS14 154 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 ZNF774Q6NX45 483 aa2.56□□□□□ -2
SPG11-225ENST00000561391 TEX261Q6UWH6 196 aa2.56□□□□□ -2
SPG11-225ENST00000561391 DHRS11Q6UWP2 260 aa2.56□□□□□ -2
SPG11-225ENST00000561391 MRPL21Q7Z2W9 205 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 LYG2Q86SG7 212 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ZNF573Q86YE8 665 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SKA3Q8IX90 412 aa2.56□□□□□ -2
SPG11-225ENST00000561391 Q8IYB0 196 aa2.56□□□□□ -2
SPG11-225ENST00000561391 OR5AS1Q8N127 324 aa2.56□□□□□ -2
SPG11-225ENST00000561391 C9orf62Q8N4C0 152 aa2.56□□□□□ -2
SPG11-225ENST00000561391 TMEM86BQ8N661 226 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SPERTQ8NA61 448 aa2.56□□□□□ -2
SPG11-225ENST00000561391 INO80EQ8NBZ0 244 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 BEST4Q8NFU0 473 aa2.56□□□□□ -2
SPG11-225ENST00000561391 OR5AP2Q8NGF4 316 aa2.56□□□□□ -2
SPG11-225ENST00000561391 OR8H1Q8NGG4 311 aa2.56□□□□□ -2
SPG11-225ENST00000561391 MITD1Q8WV92 249 aa2.56□□□□□ -2
SPG11-225ENST00000561391 EMG1Q92979 244 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
SPG11-225ENST00000561391 PPA2Q9H2U2 334 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ELL3Q9HB65 397 aaPredicted RBP2.56□□□□□ -2
SPG11-225ENST00000561391 RAB18Q9NP72 206 aa2.56□□□□□ -2
SPG11-225ENST00000561391 SLC7A10Q9NS82 523 aa2.56□□□□□ -2
SPG11-225ENST00000561391 ZNF319Q9P2F9 582 aa2.56□□□□□ -2
SPG11-225ENST00000561391 UBQLN2Q9UHD9 624 aa2.56□□□□□ -2
SPG11-225ENST00000561391 GLS2Q9UI32 602 aa2.56□□□□□ -2
SPG11-225ENST00000561391 KIF25Q9UIL4 384 aa2.56□□□□□ -2
SPG11-225ENST00000561391 PURGQ9UJV8 347 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 ANAPC10Q9UM13 185 aa2.56□□□□□ -2
SPG11-225ENST00000561391 C14orf166Q9Y224 244 aaKnown RBP2.56□□□□□ -2
SPG11-225ENST00000561391 RHBDD3Q9Y3P4 386 aa2.56□□□□□ -2
SPG11-225ENST00000561391 INSIG2Q9Y5U4 225 aa2.56□□□□□ -2
SPG11-225ENST00000561391 U3KQ87 197 aa2.56□□□□□ -2
SPG11-225ENST00000561391 IGLV5-45A0A087WSX0 123 aa2.55□□□□□ -2
SPG11-225ENST00000561391 IGKV1-9A0A0C4DH69 117 aa2.55□□□□□ -2
SPG11-225ENST00000561391 TEX13DA0A0J9YY54 714 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 KIR2DS1A0A191URI9 304 aa2.55□□□□□ -2
SPG11-225ENST00000561391 FAM230AA0A1W2PPH8 454 aa2.55□□□□□ -2
SPG11-225ENST00000561391 C9orf170A2RU37 121 aa2.55□□□□□ -2
SPG11-225ENST00000561391 C5orf49A4QMS7 147 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OR5H14A6NHG9 310 aa2.55□□□□□ -2
SPG11-225ENST00000561391 RFPL4AA6NLU0 287 aa2.55□□□□□ -2
SPG11-225ENST00000561391 FOXI3A8MTJ6 420 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 MCRIP1C9JLW8 97 aa2.55□□□□□ -2
SPG11-225ENST00000561391 RFPL4AL1F8VTS6 287 aa2.55□□□□□ -2
SPG11-225ENST00000561391 H3BSH0 61 aa2.55□□□□□ -2
SPG11-225ENST00000561391 MFNGO00587 321 aa2.55□□□□□ -2
SPG11-225ENST00000561391 TAAR5O14804 337 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SOCS1O15524 211 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PDCD6O75340 191 aa2.55□□□□□ -2
SPG11-225ENST00000561391 FOXH1O75593 365 aa2.55□□□□□ -2
SPG11-225ENST00000561391 DIRAS3O95661 229 aa2.55□□□□□ -2
SPG11-225ENST00000561391 HLA-AP01891 365 aaKnown RBP2.55□□□□□ -2
SPG11-225ENST00000561391 RLN2P04090 185 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CTSDP07339 412 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 ZNF735P0CB33 412 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CD79AP11912 226 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SLC25A4P12235 298 aa2.55□□□□□ -2
SPG11-225ENST00000561391 RPA2P15927 270 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms