RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TMEM30CPA0ZSE6 113 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 PRR32B1ATL7 298 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 FAM25AB3EWG3 89 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 FAM25CB3EWG5 89 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 FAM25GB3EWG6 89 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 PPP5D1E7EU14 171 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 H7C2Y5 167 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 SPINT2O43291 252 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 SRSF10O75494 262 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 TUSC2O75896 110 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 S1PR2O95136 353 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 OR2C1O95371 312 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 BAG2O95816 211 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 SCGB1D2O95969 90 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 CD74P04233 296 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 MRPL3P09001 348 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 TMEM225BP0DP42 221 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 CCL1P22362 96 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 TALDO1P37837 337 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 MAGEA2P43356 314 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 PAX5Q02548 391 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 LIPEQ05469 1076 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 ATP5G2Q06055 141 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 C6orf141Q5SZD1 244 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 IQCF1Q8N6M8 205 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 TSPAN14Q8NG11 270 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 KCNG3Q8TAE7 436 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 CD300LFQ8TDQ1 290 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 S100ZQ8WXG8 99 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 PP6455Q8WZ26 134 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 GHSRQ92847 366 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 ASB9Q96DX5 294 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 MRPS24Q96EL2 167 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 SLC29A1Q99808 456 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 APOL4Q9BPW4 351 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 DPCDQ9BVM2 203 aaPredicted RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 WDR12Q9GZL7 423 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 RHOFQ9HBH0 211 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 CMTM6Q9NX76 183 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 DAPK2Q9UIK4 370 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
HERC1-213ENST00000561359 SNX5Q9Y5X3 404 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 TMEM14AQ9Y6G1 99 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 V9GYQ6 96 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 A0A087WXM4 84 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 IGHV4-28A0A0C4DH34 117 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 TMEM213A2RRL7 107 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 BBIP1A8MTZ0 92 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 MAGEB4O15481 346 aaPredicted RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 ORC5O43913 435 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 GGCTO75223 188 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 RPP14O95059 124 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 SNAPINO95295 136 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 FADS2O95864 444 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 CA1P00915 261 aaPredicted RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 APELAP0DMC3 54 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 DBTP11182 482 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 ATF1P18846 271 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 XGP55808 180 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 RHOGP84095 191 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 TMEM187Q14656 261 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 CDK10Q15131 360 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 PSG5Q15238 335 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 ODF3L2Q3SX64 289 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 RNF212Q495C1 297 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 FAM106AQ4KMX7 169 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 COQ5Q5HYK3 327 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 C1orf146Q5VVC0 180 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 ZFP1Q6P2D0 407 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 APRG1Q8IVJ8 170 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 CPOQ8IVL8 374 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SAXO1Q8IYX7 474 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 ADGRG5Q8IZF4 528 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 Q8NAQ8 132 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SUMF2Q8NBJ7 301 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 BBS1Q8NFJ9 593 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 TEX47Q8TBZ9 253 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 NEK7Q8TDX7 302 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 C10orf35Q96D05 121 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 TMEM80Q96HE8 168 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 TMEM68Q96MH6 324 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 ABHD14AQ9BUJ0 271 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SCRT1Q9BWW7 348 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 RNF167Q9H6Y7 350 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 RAB9BQ9NP90 201 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 OR2S2Q9NQN1 319 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 ENOPH1Q9UHY7 261 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 ZNF230Q9UIE0 474 aaPredicted RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 SLC45A2Q9UMX9 530 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 DIMT1Q9UNQ2 313 aaKnown RBP3.81□□□□□ -1.8
HERC1-213ENST00000561359 TNFRSF18Q9Y5U5 241 aa3.81□□□□□ -1.8
HERC1-213ENST00000561359 SAA2-SAA4A0A096LPE2 208 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms