RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 HLA-DMAP28067 261 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 REG1BP48304 166 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 RBMS2Q15434 407 aaKnown RBP9.25□□□□□ -0.93
IRF9-213ENST00000561342 RNASE10Q5GAN6 216 aaKnown RBP9.25□□□□□ -0.93
IRF9-213ENST00000561342 ATAD3CQ5T2N8 411 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 FAM71E2Q8N5Q1 922 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 S1PR3Q99500 378 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 PRRT1Q99946 306 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 NICN1Q9BSH3 213 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 PLSCR3Q9NRY6 295 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 NUDT15Q9NV35 164 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 PLEKHJ1Q9NW61 149 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 RCC2Q9P258 522 aaKnown RBP9.25□□□□□ -0.93
IRF9-213ENST00000561342 GNG12Q9UBI6 72 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 SCP2D1Q9UJQ7 156 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 SMAD5-AS1Q9Y6J3 95 aa9.25□□□□□ -0.93
IRF9-213ENST00000561342 IGHV3-72A0A0B4J1Y9 119 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 TRAV39A0A0B4J263 110 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 A0A1W2PPE3 182 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 FOXI3A8MTJ6 420 aaPredicted RBP9.24□□□□□ -0.93
IRF9-213ENST00000561342 MCRIP1C9JLW8 97 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 SOCS1O15524 211 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 NDUFB6O95139 128 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 CD74P04233 296 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
IRF9-213ENST00000561342 INSL3P51460 131 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 RAB25P57735 213 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 TAS2R46P59540 309 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 CFHR3Q02985 330 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 FHL3Q13643 280 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 TATDN3Q17R31 274 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 GAPTQ8N292 157 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 OR4C16Q8NGL9 310 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 NUDCD2Q8WVJ2 157 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 ARHGAP5-AS1Q96IT6 56 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 PECRQ9BY49 303 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 TRAPPC2LQ9UL33 140 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 ANAPC10Q9UM13 185 aa9.24□□□□□ -0.93
IRF9-213ENST00000561342 A0A1W2PP11 408 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 MEIS3P1A6NDR6 274 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 HMX3A6NHT5 357 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 LINC01548A6NM66 108 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 PDCD6O75340 191 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 CD3DP04234 171 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 NAT1P18440 290 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 DTYMKP23919 212 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 PSMB8P28062 276 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 ECI1P42126 302 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 PLAC9Q5JTB6 97 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 TMEM17Q86X19 198 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 CCDC107Q8WV48 283 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 SLC25A21Q9BQT8 299 aaPredicted RBP9.23□□□□□ -0.93
IRF9-213ENST00000561342 GPN1Q9HCN4 374 aaPredicted RBP9.23□□□□□ -0.93
IRF9-213ENST00000561342 SLC2A8Q9NY64 477 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 ETAA1Q9NY74 926 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 ZNF581Q9P0T4 197 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 ALG5Q9Y673 324 aa9.23□□□□□ -0.93
IRF9-213ENST00000561342 RYR1P21817 5038 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 TRAV6A0A075B6T7 132 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 C7orf66A4D0T2 115 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 SEC14L6B5MCN3 397 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 C12orf77C9JDV5 145 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 HBZP02008 142 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 IFNA6P05013 189 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 FUT3P21217 361 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 CCR6P51684 374 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 TMEM50BP56557 158 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 RUNX1Q01196 453 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 CT45A1Q5HYN5 189 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 HOGA1Q86XE5 327 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 ARRDC1Q8N5I2 433 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 CT45A3Q8NHU0 189 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 NEURL2Q9BR09 285 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 KCNIP1Q9NZI2 227 aa9.22□□□□□ -0.93
IRF9-213ENST00000561342 IGHV3-43A0A0B4J1X8 118 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 SSX5O60225 188 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 CCNKO75909 580 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 RGS11O94810 467 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 OR8U8P0C7N1 319 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 IGHV3-43DP0DP04 118 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 MECP2P51608 486 aaKnown RBP9.21□□□□□ -0.94
IRF9-213ENST00000561342 LUMP51884 338 aaPredicted RBP9.21□□□□□ -0.94
IRF9-213ENST00000561342 MMDQ15546 238 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 DEFB136Q30KP8 78 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 LY6G6FQ5SQ64 297 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 TMEM65Q6PI78 240 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 OR51S1Q8NGJ8 323 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 OR5H2Q8NGV7 314 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 SCGB3A2Q96PL1 93 aa9.21□□□□□ -0.94
IRF9-213ENST00000561342 CMSS1Q9BQ75 279 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms