RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 FAM212BQ9NTI7 297 aaPredicted RBP5.58□□□□□ -1.52
SPG11-224ENST00000561268 UQCC1Q9NVA1 299 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 MTCH1Q9NZJ7 389 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 ANXA10Q9UJ72 324 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 NSG2Q9Y328 171 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 STRAPQ9Y3F4 350 aaKnown RBP5.58□□□□□ -1.52
SPG11-224ENST00000561268 TMED3Q9Y3Q3 217 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 FBXO24O75426 580 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 DEDDO75618 318 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 SCO1O75880 301 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 NXPH2O95156 264 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 DIRAS3O95661 229 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 CDS2O95674 445 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 CSN2P05814 226 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 FCGR3AP08637 254 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 GNB3P16520 340 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 AKR1C4P17516 323 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 NDUFB7P17568 137 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 OMGP23515 440 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 LMO1P25800 156 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 PRDX2P32119 198 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 MAS1LP35410 378 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 CEBPDP49716 269 aaPredicted RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 DYNLT3P51808 116 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 SNU13P55769 128 aaKnown RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 RND3P61587 244 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 RPL31P62899 125 aaKnown RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 ZNF146Q15072 292 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 LDLRAD2Q5SZI1 272 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 TMEM200BQ69YZ2 307 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 BTNL8Q6UX41 500 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 C17orf107Q6ZR85 190 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 LINC00596Q86U02 117 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 MKXQ8IYA7 352 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 Q8IYB0 196 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 SAXO1Q8IYX7 474 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 LINC00518Q8N0U6 118 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 Q8N2B8 174 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 PNKDQ8N490 385 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 GVQW1Q8N7I0 195 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 C15orf54Q8N8G6 183 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 CCDC71LQ8N9Z2 235 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 OR11H6Q8NGC7 330 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 OR1S2Q8NGQ3 325 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 PIFOQ8TCI5 191 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 WIPF2Q8TF74 440 aaPredicted RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 H1FXQ92522 213 aaKnown RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 TCEAL7Q9BRU2 100 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 PECRQ9BY49 303 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 METTL9Q9H1A3 318 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 TAF9BQ9HBM6 251 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 NECAP2Q9NVZ3 263 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 RCC2Q9P258 522 aaKnown RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 ZNF230Q9UIE0 474 aaPredicted RBP5.57□□□□□ -1.52
SPG11-224ENST00000561268 RNF114Q9Y508 228 aa5.57□□□□□ -1.52
SPG11-224ENST00000561268 BORCS7-ASMTA0A0B4J1R7 106 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 UMAD1C9J7I0 102 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 H0YIZ8 118 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 K7EPK0 472 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SOCS1O15524 211 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 CHST1O43916 411 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 CRTAPO75718 401 aaPredicted RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 MPIG6BO95866 241 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 S100A8P05109 93 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 CTXN2P0C2S0 81 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SLC25A6P12236 298 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 CCL3L1P16619 93 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 PVALBP20472 110 aaPredicted RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 GABRA2P47869 451 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 P2RY1P47900 373 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 FUT6P51993 359 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 ERVFRD-1P60508 538 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 DEFA5Q01523 94 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 PAX5Q02548 391 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 PRB3Q04118 309 aaPredicted RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 MEF2CQ06413 473 aaPredicted RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 ARFRP1Q13795 201 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 RBM39Q14498 530 aaKnown RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 LRRC75BQ2VPJ9 315 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SPIN3Q5JUX0 258 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 OR52W1Q6IF63 320 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 OR10K2Q6IF99 312 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 DPPA3Q6W0C5 159 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 PUSL1Q8N0Z8 303 aaKnown RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 ADAD2Q8NCV1 583 aaKnown RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 TMEM104Q8NE00 496 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 OR51T1Q8NGJ9 327 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 CFHR4Q92496 578 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 IL22RA2Q969J5 263 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 MALSU1Q96EH3 234 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 ARHGAP5-AS1Q96IT6 56 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SEC22AQ96IW7 307 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 GPER1Q99527 375 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SPIN2AQ99865 258 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 SPIN2BQ9BPZ2 258 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 GINS3Q9BRX5 216 aa5.56□□□□□ -1.52
SPG11-224ENST00000561268 RIMS4Q9H426 269 aaPredicted RBP5.56□□□□□ -1.52
SPG11-224ENST00000561268 KCNK15Q9H427 330 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms