RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 CXorf58Q96LI9 332 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 PSMG3-AS1Q96PY0 264 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 FAM103A1Q9BTL3 118 aaKnown RBP7.99□□□□□ -1.13
TRPM1-212ENST00000560801 NAA60Q9H7X0 242 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF319Q9P2F9 582 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF701M0R085 212 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-212ENST00000560801 B3GALNT1O75752 331 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 SSX1Q16384 188 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 GGNBP1Q5YKI7 109 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 OR4B1Q8NGF8 309 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 TMED3Q9Y3Q3 217 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 CEPT1Q9Y6K0 416 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 BMPR1BO00238 502 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 CHATP28329 748 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 ARL3P36405 182 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 ELLP55199 621 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-212ENST00000560801 KRTAP10-9P60411 292 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 RRN3P1Q2M238 152 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 TM4SF20Q53R12 229 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 C1orf100Q5SVJ3 147 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 MYPOPQ86VE0 399 aaPredicted RBP7.99□□□□□ -1.13
TRPM1-212ENST00000560801 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 OR1B1Q8NGR6 318 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 Q8TCH9 128 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 SPSB4Q96A44 273 aa7.99□□□□□ -1.13
TRPM1-212ENST00000560801 WNK1Q9H4A3 2382 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 NPPCP23582 126 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 NPY1RP25929 384 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 HLA-DRB5Q30154 266 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 PTX4Q96A99 478 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 LYZL4Q96KX0 146 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 FOXA2Q9Y261 457 aaPredicted RBP7.98□□□□□ -1.13
TRPM1-212ENST00000560801 KBTBD11O94819 623 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 ALDH3B2P48448 385 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 UBE2G1P62253 170 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 GAMTQ14353 236 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 FOXL2NBQ6ZUU3 175 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.98□□□□□ -1.13
TRPM1-212ENST00000560801 SMIM4Q8WVI0 70 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 DDB2Q92466 427 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 VSIG4Q9Y279 399 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 OR5AC1P0C628 307 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 HTR2BP41595 481 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 C1QL2Q7Z5L3 287 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 PIP4P2Q8N4L2 257 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 GIMAP1Q8WWP7 306 aa7.98□□□□□ -1.13
TRPM1-212ENST00000560801 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
TRPM1-212ENST00000560801 RNF166Q96A37 237 aaPredicted RBP7.98□□□□□ -1.13
TRPM1-212ENST00000560801 ARPC5O15511 151 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 TCRBP04435 133 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 REG1AP05451 166 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 PTBP1P26599 531 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 SNRPD3P62318 126 aaKnown RBP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 KLF9Q13886 244 aaPredicted RBP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 CCDC28AQ8IWP9 274 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 CD177Q8N6Q3 437 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 HSD17B11Q8NBQ5 300 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 OR52B4Q8NGK2 314 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 RNF138Q8WVD3 245 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF486Q96H40 463 aaPredicted RBP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 VPREB3Q9UKI3 123 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF503-AS2A6NEH8 195 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 MSGN1A6NI15 193 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 CCSO14618 274 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 C11orf91Q3C1V1 193 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 Q6ZR03 302 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 PLPPR1Q8TBJ4 325 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 JKAMPQ9P055 326 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 MTFP1Q9UDX5 166 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 RP2O75695 350 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 HOGA1Q86XE5 327 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 DTD1Q8TEA8 209 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 SLC2A9Q9NRM0 540 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 TMEM140Q9NV12 185 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 IGHV4-59P01825 116 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 CLEC19AQ6UXS0 136 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 KLHDC1Q8N7A1 406 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 TNRC6AQ8NDV7 1962 aaKnown RBP7.97□□□□□ -1.13
TRPM1-212ENST00000560801 SHANK1Q9Y566 2161 aa7.97□□□□□ -1.13
TRPM1-212ENST00000560801 COL5A1P20908 1838 aaPredicted RBP7.96□□□□□ -1.13
TRPM1-212ENST00000560801 TRAV30A0A087WSZ9 112 aa7.96□□□□□ -1.13
TRPM1-212ENST00000560801 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.13
TRPM1-212ENST00000560801 ZNF137PP52743 207 aa7.96□□□□□ -1.13
TRPM1-212ENST00000560801 FAM76BQ5HYJ3 339 aa7.96□□□□□ -1.13
TRPM1-212ENST00000560801 MFFQ9GZY8 342 aa7.96□□□□□ -1.13
TRPM1-212ENST00000560801 IGKV1D-17A0A075B6S4 117 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 A0A0A6YYJ9 748 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 GPR183P32249 361 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 TRIM63Q969Q1 353 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 C16orf92Q96LL3 132 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 ATP5SQ99766 215 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 UQCC1Q9NVA1 299 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 IGHV3OR16-13A0A075B7E8 117 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 TRBV5-7A0A0A0MS05 114 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 IGHV3-74A0A0B4J1X5 117 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 ALX3O95076 343 aa7.96□□□□□ -1.14
TRPM1-212ENST00000560801 HIST1H3AP68431 136 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms