RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 KLF2Q9Y5W3 355 aaPredicted RBP8.04□□□□□ -1.12
RTF1-206ENST00000560447 EP300Q09472 2414 aaPredicted RBP8.03□□□□□ -1.12
RTF1-206ENST00000560447 TRAV38-1A0A0B4J264 116 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 hADV38S2A0JD32 116 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 A6NJY4 79 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 CEBPZOSA8MTT3 80 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 K7EM74 188 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 M0R1X1 148 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 NXPH3O95157 252 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 BCL2P10415 239 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 MDKP21741 143 aaPredicted RBP8.03□□□□□ -1.12
RTF1-206ENST00000560447 BMP5P22003 454 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 CCKARP32238 428 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 TMPRSS3P57727 454 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 RAB5BP61020 215 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 TBR1Q16650 682 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 C17orf58Q2M2W7 97 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 FAM71F2Q6NXP2 309 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 GFRALQ6UXV0 394 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 SPACA3Q8IXA5 215 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 TPRX1Q8N7U7 411 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 ZNF709Q8N972 641 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 C8orf31Q8N9H6 132 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 Q8NA96 180 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 ZNF439Q8NDP4 499 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 OR4A16Q8NH70 328 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 RFESDQ8TAC1 157 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 RAB39BQ96DA2 213 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 RCC1LQ96I51 464 aaKnown RBP8.03□□□□□ -1.12
RTF1-206ENST00000560447 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 BIN3Q9NQY0 253 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 LINC00312Q9Y6C7 94 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 USF3Q68DE3 2245 aa8.03□□□□□ -1.12
RTF1-206ENST00000560447 DYSFO75923 2080 aa8.02□□□□□ -1.12
RTF1-206ENST00000560447 DSCAMO60469 2012 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 HCFC1P51610 2035 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.13
RTF1-206ENST00000560447 IGHV3-43A0A0B4J1X8 118 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 UBE2L5PA0A1B0GUS4 154 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 M0R036 132 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 NDUFA2O43678 99 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 FCGR3BO75015 233 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 PROP1O75360 226 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 TSPAN9O75954 239 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 HRASP01112 189 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 IFNA4P05014 189 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 SNRNP70P08621 437 aaKnown RBP8.02□□□□□ -1.13
RTF1-206ENST00000560447 IGHV3-43DP0DP04 118 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 NFYBP25208 207 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RAB13P51153 203 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 EDDM3BP56851 147 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 OR2B8PP59922 312 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 CCL20P78556 96 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 DLK1P80370 383 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 SMUG1Q53HV7 270 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 PRAMEF5Q5TYX0 476 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 VHLLQ6RSH7 139 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 BTNL3Q6UXE8 466 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 ASCL5Q7RTU5 278 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 ZNRF1Q8ND25 227 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RXFP4Q8TDU9 374 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RAB1CQ92928 201 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 VKORC1Q9BQB6 163 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 NIPSNAP3BQ9BS92 247 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RSG1Q9BU20 258 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
RTF1-206ENST00000560447 GAL3ST2Q9H3Q3 398 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 MANBALQ9NQG1 85 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 VAX2Q9UIW0 290 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 RPUSD1Q9UJJ7 312 aaKnown RBP8.02□□□□□ -1.13
RTF1-206ENST00000560447 WDR83OSQ9Y284 106 aa8.02□□□□□ -1.13
RTF1-206ENST00000560447 CNOT1A5YKK6 2376 aaKnown RBP8.02□□□□□ -1.13
RTF1-206ENST00000560447 IGHV3OR15-7A0A075B7D8 119 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 MEX3AA1L020 520 aaKnown RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 C15orf61A6NNL5 157 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 TGOLN2O43493 480 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 FSTL3O95633 263 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 OR13C7P0DN81 318 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 DAOP14920 347 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 VDAC2P45880 294 aaPredicted RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 RAB11AP62491 216 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 ADIPOQQ15848 244 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 OR8G2PQ6IF36 304 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 SLC25A48Q6ZT89 311 aaKnown RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 C1QL4Q86Z23 238 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 RND1Q92730 232 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 RARRES2Q99969 163 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 TXNDC17Q9BRA2 123 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 DCTN5Q9BTE1 182 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms