RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 MINOS1-NBL1R4GNA1 71 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TMEM56-RWDD3S4R434 201 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ZFHX3Q15911 3703 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 C13orf42A0A1B0GVH6 325 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 DBX1A6NMT0 343 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 H7C2Y5 167 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 FCGR3BO75015 233 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 SNAPC5O75971 98 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 HPRT1P00492 218 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 HRASP01112 189 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 HOXB5P09067 269 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 MMP9P14780 707 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 LPAR6P43657 344 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 RAB13P51153 203 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 AKR1C2P52895 323 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 BPIFB3P59826 476 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 RAP2BP61225 183 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 CD83Q01151 205 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 FGL1Q08830 312 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 EIF4EBP1Q13541 118 aaPredicted RBP5.23□□□□□ -1.57
SPG11-221ENST00000560299 TMEM249Q2WGJ8 235 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 ANKRD55Q3KP44 614 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 MIDNQ504T8 468 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 GPR157Q5UAW9 335 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 CYB5R2Q6BCY4 276 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 THOC7Q6I9Y2 204 aaKnown RBP5.23□□□□□ -1.57
SPG11-221ENST00000560299 H2BFWTQ7Z2G1 175 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 ODF3L1Q8IXM7 274 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 SELENOHQ8IZQ5 122 aaKnown RBP5.23□□□□□ -1.57
SPG11-221ENST00000560299 OR8H3Q8N146 312 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 DRAXINQ8NBI3 349 aaPredicted RBP5.23□□□□□ -1.57
SPG11-221ENST00000560299 OR5M8Q8NGP6 311 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 LHX4Q969G2 390 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 ST6GALNAC6Q969X2 333 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 MSI2Q96DH6 328 aaKnown RBP5.23□□□□□ -1.57
SPG11-221ENST00000560299 C2orf50Q96LR7 162 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 PLEKHA2Q9HB19 425 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 SLC35D1Q9NTN3 355 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 ATRQ13535 2644 aa5.23□□□□□ -1.57
SPG11-221ENST00000560299 JMJD1CQ15652 2540 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 SONP18583 2426 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 A0A1B0GU03 582 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 LINC00473A8K010 186 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 ODF3BA8MYP8 253 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 PROP1O75360 226 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR2A4O95047 310 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 RLN2P04090 185 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 GIPP09681 153 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 PET100P0DJ07 73 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 CT45A6P0DMU7 189 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 CT45A5P0DMU8 189 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 CT45A7P0DMV0 189 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 SLC25A6P12236 298 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 NQO2P16083 231 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 HOXB4P17483 251 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 BRS3P32247 399 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 RPL30P62888 115 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 KRTAP1-1Q07627 177 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 ZNF816Q0VGE8 651 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 SMCO1Q147U7 214 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 IAH1Q2TAA2 248 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR2B11Q5JQS5 317 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 TPTE2P1Q5T6R2 138 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 GGNBP1Q5YKI7 109 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 MOB3BQ86TA1 216 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 PDPNQ86YL7 162 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 SLC35G3Q8N808 338 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 DMBX1Q8NFW5 382 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR11H7Q8NGC8 314 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR5AN1Q8NGI8 311 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR4P4Q8NGL7 312 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR4C13Q8NGP0 309 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OSR1Q8TAX0 266 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 LSM10Q969L4 123 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 FLYWCH2Q96CP2 140 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 MALSU1Q96EH3 234 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 OR2A7Q96R45 310 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 TBX15Q96SF7 602 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 GPHA2Q96T91 129 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 RNF5Q99942 180 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 NABP2Q9BQ15 211 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 NEURL2Q9BR09 285 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 ZNF251Q9BRH9 671 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 CHIAQ9BZP6 476 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 NMES1Q9C002 83 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 RANBP3Q9H6Z4 567 aaPredicted RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 ITGB1BP2Q9UKP3 347 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 WASHC3Q9Y3C0 194 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 MMP24Q9Y5R2 645 aa5.22□□□□□ -1.57
SPG11-221ENST00000560299 FN1P02751 2386 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 ANK3Q12955 4377 aaKnown RBP5.22□□□□□ -1.57
SPG11-221ENST00000560299 IGHV1-69DA0A0B4J2H0 117 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 IGHV1-3A0A0C4DH29 117 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 CENPVL3A0A0U1RRI6 287 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 MARCH11A6NNE9 402 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 FAM90A9PA6NNJ1 464 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 RNASEK-C17orf49H0YIS7 233 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 H0YJW9 148 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms