RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TATDN3Q17R31 274 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 IZUMO4Q1ZYL8 232 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 RNF151Q2KHN1 245 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 C2orf68Q2NKX9 166 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ANKRD55Q3KP44 614 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 KRTAP21-3Q3LHN1 58 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ABCA11PQ4W5N1 156 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 FAM120AOSQ5T036 256 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 TPTE2P1Q5T6R2 138 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 NCR3LG1Q68D85 454 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ZNF626Q68DY1 528 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 PLET1Q6UQ28 207 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ZNF554Q86TJ5 538 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 SLC38A6Q8IZM9 456 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 OR10A7Q8NGE5 316 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 OR52M1Q8NGK5 317 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 OR13D1Q8NGV5 346 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 OR9G1Q8NH87 305 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 LHFPL5Q8TAF8 219 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 TCTEX1D2Q8WW35 142 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 RTN4IP1Q8WWV3 396 aaPredicted RBP4.2□□□□□ -1.74
SPG11-220ENST00000559933 RITA1Q96K30 269 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 YAE1D1Q9NRH1 226 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CDC42EP3Q9UKI2 254 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 NUBP2Q9Y5Y2 271 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ALG5Q9Y673 324 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 A0A0A6YYJ9 748 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 IGHV1-3A0A0C4DH29 117 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 A0A0G2JRQ6 117 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 TEX13DA0A0J9YY54 714 aaPredicted RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 C9orf170A2RU37 121 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 CRYM-AS1A6NIL9 109 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 TIMM23O14925 209 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 CD5LO43866 347 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 FCGR3BO75015 233 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 ADAP1O75689 374 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 S1PR2O95136 353 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 NXPH3O95157 252 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 SIX6O95475 246 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 SFT2D2O95562 160 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1-39P01597 117 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 HLA-AP01891 365 aaKnown RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1-16P04430 117 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1D-39P04432 117 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 OR4E1P0C645 316 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 DUTP33316 252 aaKnown RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 RAB7AP51149 207 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 UBE2E1P51965 193 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 UCP3P55916 312 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 CD83Q01151 205 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 CBX3Q13185 183 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 C4orf46Q504U0 113 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 ZNF833PQ6ZTB9 187 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 KCTD9Q7L273 389 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 MOB3BQ86TA1 216 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 SLC25A42Q86VD7 318 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 VKORC1L1Q8N0U8 176 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 LINC00311Q8N616 119 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 ZDHHC22Q8N966 263 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 DUSP18Q8NEJ0 188 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 OR11H6Q8NGC7 330 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 ZNF596Q8TC21 504 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 TAF15Q92804 592 aaKnown RBP eCLIP4.19□□□□□ -1.74
SPG11-220ENST00000559933 ST6GALNAC6Q969X2 333 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 RPEQ96AT9 228 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 C18orf12Q96KH6 178 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 ZNF48Q96MX3 618 aaPredicted RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 NABP2Q9BQ15 211 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 MARVELD1Q9BSK0 173 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 NAA60Q9H7X0 242 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 UNKLQ9H9P5 680 aaKnown RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 TNFRSF19Q9NS68 423 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 COPZ2Q9P299 210 aa4.19□□□□□ -1.74
SPG11-220ENST00000559933 C14orf166Q9Y224 244 aaKnown RBP4.19□□□□□ -1.74
SPG11-220ENST00000559933 C3orf85A0A1B0GTC6 90 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 hCG_1809904A0A1W2PP81 198 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 A0A1W2PPE2 198 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 A0A1W2PR64 198 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 A0A1W2PRV1 198 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SH2D7A6NKC9 451 aaPredicted RBP4.18□□□□□ -1.74
SPG11-220ENST00000559933 MPTX1A8MV57 137 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 INAFM1C9JVW0 142 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 H0YJW9 148 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 RAB29O14966 203 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 MPPED1O15442 326 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 CD99P14209 185 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 MYOD1P15172 320 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 HTR1DP28221 377 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 PRRX1P54821 245 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 RND3P61587 244 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SRSF2Q01130 221 aaKnown RBP4.18□□□□□ -1.74
SPG11-220ENST00000559933 CD300CQ08708 224 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 DHRS2Q13268 280 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 HNF4GQ14541 408 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 TMEM187Q14656 261 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SURF2Q15527 256 aaPredicted RBP4.18□□□□□ -1.74
SPG11-220ENST00000559933 LY6EQ16553 131 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms