RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 A6NDX4 124 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 SHOXO15266 292 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 CRYZL1O95825 349 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 TCRBP04435 133 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 F2RP25116 425 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 SLC6A1P30531 599 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 BTCP35070 178 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 RND3P61587 244 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 EIF4EBP1Q13541 118 aaPredicted RBP11.49□□□□□ -0.57
SMAD6-204ENST00000559931 C11orf88Q6PI97 169 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 PRIMA1Q86XR5 153 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 CENPSQ8N2Z9 138 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 OR4S2Q8NH73 311 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 CD300LFQ8TDQ1 290 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 DDB2Q92466 427 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 SLC25A33Q9BSK2 321 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 LIN7CQ9NUP9 197 aaKnown RBP11.49□□□□□ -0.57
SMAD6-204ENST00000559931 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
SMAD6-204ENST00000559931 TRAV6A0A075B6T7 132 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 C3orf85A0A1B0GTC6 90 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 TRIM77I1YAP6 450 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
SMAD6-204ENST00000559931 IGKV1-16P04430 117 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 CRYBA1P05813 215 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 SERPINE2P07093 398 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 LPAR6P43657 344 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 EBI3Q14213 229 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
SMAD6-204ENST00000559931 CCBE1Q6UXH8 406 aaPredicted RBP11.48□□□□□ -0.57
SMAD6-204ENST00000559931 RITA1Q96K30 269 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 RBM14Q96PK6 669 aaKnown RBP11.48□□□□□ -0.57
SMAD6-204ENST00000559931 RAB18Q9NP72 206 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 C1RLQ9NZP8 487 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
SMAD6-204ENST00000559931 CLDN34H7C241 214 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 GPR137BO60478 399 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 RAMP3O60896 148 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 OR2F2O95006 317 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 TAS2R31P59538 309 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 UBA52P62987 128 aaKnown RBP11.47□□□□□ -0.57
SMAD6-204ENST00000559931 PLGLAQ15195 96 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 MMDQ15546 238 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 SP6Q3SY56 376 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 FBLN7Q53RD9 439 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 LIAT1Q6ZQX7 453 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 TCTEX1D1Q8N7M0 179 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 TSNAXQ99598 290 aaKnown RBP11.47□□□□□ -0.57
SMAD6-204ENST00000559931 RNF5Q99942 180 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 NAA60Q9H7X0 242 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 NUDT15Q9NV35 164 aa11.47□□□□□ -0.57
SMAD6-204ENST00000559931 CRYM-AS1A6NIL9 109 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 HPRT1P00492 218 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 HRASP01112 189 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 H2AFB2P0C5Z0 115 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 VAMP1P23763 118 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 CNTFRP26992 372 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 LGALS7P47929 136 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 F2RL1P55085 397 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.57
SMAD6-204ENST00000559931 TRIM16LQ309B1 348 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 TMEM177Q53S58 311 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 TMEM128Q5BJH2 165 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 OR8H1Q8NGG4 311 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 OSR1Q8TAX0 266 aaPredicted RBP11.46□□□□□ -0.57
SMAD6-204ENST00000559931 RASL11BQ9BPW5 248 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 AIFM2Q9BRQ8 373 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 BEX1Q9HBH7 125 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 NUBP2Q9Y5Y2 271 aa11.46□□□□□ -0.57
SMAD6-204ENST00000559931 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 H0Y980 276 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 M0QZK8 103 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 NBR2O15453 112 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 RBFOX2O43251 390 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMAD6-204ENST00000559931 CHST1O43916 411 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 B3GALNT1O75752 331 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 RNASE1P07998 156 aaKnown RBP11.45□□□□□ -0.58
SMAD6-204ENST00000559931 OR5AC1P0C628 307 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 ANXA3P12429 323 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 RPA2P15927 270 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 ANXA7P20073 488 aaKnown RBP11.45□□□□□ -0.58
SMAD6-204ENST00000559931 RAB25P57735 213 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 ERVK-16P61578 105 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 PLET1Q6UQ28 207 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 SLC25A42Q86VD7 318 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 Q8N6K4 173 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 TMEM230Q96A57 120 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 TP53RKQ96S44 253 aa11.45□□□□□ -0.58
SMAD6-204ENST00000559931 A0A1B0GVG6 124 aa11.44□□□□□ -0.58
SMAD6-204ENST00000559931 RRHO14718 337 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms