RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 HPRT1P00492 218 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 VDAC1P21796 283 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 LGALS4P56470 323 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 SRSF4Q08170 494 aaKnown RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 GSG1LQ6UXU4 331 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 OR4S2Q8NH73 311 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 FYTTD1Q96QD9 318 aaKnown RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 SLC35D1Q9NTN3 355 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 FLNAP21333 2647 aaKnown RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 IGHV1-3A0A0C4DH29 117 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 C13orf42A0A1B0GVH6 325 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 C5orf51A6NDU8 294 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 FAM25EA8MYX2 175 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 EPHA1P21709 976 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 MIDNQ504T8 468 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 NMSQ5H8A3 153 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 CYB5R2Q6BCY4 276 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 DHRS7BQ6IAN0 325 aaPredicted RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 ASB13Q8WXK3 278 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 WDR89Q96FK6 387 aaPredicted RBP9.85□□□□□ -0.83
HERC1-205ENST00000559886 OR10C1Q96KK4 312 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 CHIAQ9BZP6 476 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 TEX15Q9BXT5 2789 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 A0A1W2PPI3 338 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 NPFFO15130 113 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 AVPP01185 164 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 IGKV1-5P01602 117 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 APOA2P02652 100 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 RRASP10301 218 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 MC5RP33032 325 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 TCTE3Q8IZS6 198 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 LSM10Q969L4 123 aaKnown RBP9.84□□□□□ -0.83
HERC1-205ENST00000559886 AJUBAQ96IF1 538 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 COMMD9Q9P000 198 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 CSPG4Q6UVK1 2322 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 IGHV1-69DA0A0B4J2H0 117 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 OOSP1A8MZH6 123 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 CRYZL1O95825 349 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 IGHV1-69P01742 117 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 SAA4P35542 130 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 RAP2BP61225 183 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 PDPNQ86YL7 162 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 OR8H3Q8N146 312 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 C2orf50Q96LR7 162 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 PDCD10Q9BUL8 212 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 WASHC3Q9Y3C0 194 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 HILPDAQ9Y5L2 63 aa9.84□□□□□ -0.83
HERC1-205ENST00000559886 TRAV40A0A0B4J280 105 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 ATG12O94817 140 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 KRASP01116 189 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 G6PCP35575 357 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 AKR1C2P52895 323 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 GPR157Q5UAW9 335 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 MOB3BQ86TA1 216 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 C17orf50Q8WW18 174 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 R3HDM4Q96D70 268 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 MALSU1Q96EH3 234 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 NMES1Q9C002 83 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 BAHCC1Q9P281 2608 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 A0A0G2JRQ6 117 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 MARCH11A6NNE9 402 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 H7C2Y5 167 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 P0C879 139 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 RAB13P51153 203 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 CYCSP99999 105 aaKnown RBP9.83□□□□□ -0.84
HERC1-205ENST00000559886 HABP2Q14520 560 aaPredicted RBP9.83□□□□□ -0.84
HERC1-205ENST00000559886 SSX2Q16385 188 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 IAH1Q2TAA2 248 aaPredicted RBP9.83□□□□□ -0.84
HERC1-205ENST00000559886 CCDC144NLQ6NUI1 221 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 RRNAD1Q96FB5 475 aaKnown RBP9.83□□□□□ -0.84
HERC1-205ENST00000559886 ITGB1BP2Q9UKP3 347 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 MMP24Q9Y5R2 645 aa9.83□□□□□ -0.84
HERC1-205ENST00000559886 TIMM23O14925 209 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 IGHV4-38-2P0DP08 117 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 SLC25A6P12236 298 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 NQO2P16083 231 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 IL15RAQ13261 267 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 TMEM177Q53S58 311 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 KLF17Q5JT82 389 aaPredicted RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 FAM219AQ8IW50 185 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 OR4C13Q8NGP0 309 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 RNASE11Q8TAA1 199 aaKnown RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 PPP1R14BQ96C90 147 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 GPR146Q96CH1 333 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 RBMXL1Q96E39 390 aaKnown RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 SPIN2AQ99865 258 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 SPIN2BQ9BPZ2 258 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 IGHV3OR16-10A0A075B7F0 116 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 IGHV3-72A0A0B4J1Y9 119 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 SMAD7O15105 426 aaKnown RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 POU2AF1Q16633 256 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 ZBTB8BQ8NAP8 495 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms