RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CIB3Q96Q77 187 aaPredicted RBP13.14□□□□□ -0.31
USP8-208ENST00000559329 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 KIR2DS2P43631 304 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 TLE1Q04724 770 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 PDLIM3Q53GG5 364 aaPredicted RBP13.13□□□□□ -0.31
USP8-208ENST00000559329 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 IDI2-AS1Q9NZ38 188 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 RBFOX3A6NFN3 312 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
USP8-208ENST00000559329 NFYBP25208 207 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 SERF2P84101 59 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
USP8-208ENST00000559329 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP8-208ENST00000559329 RARRES2Q99969 163 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 QTRT1Q9BXR0 403 aaKnown RBP13.13□□□□□ -0.31
USP8-208ENST00000559329 NGBQ9NPG2 151 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 PRELID3BQ9Y3B1 194 aa13.13□□□□□ -0.31
USP8-208ENST00000559329 TRAV38-1A0A0B4J264 116 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 NKX6-3A6NJ46 265 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 E7EQL1 145 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 TMEM178BH3BS89 294 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 ATP6V1FQ16864 119 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 VWC2Q2TAL6 325 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 OR8G2PQ6IF36 304 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 S1PR3Q99500 378 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
USP8-208ENST00000559329 TIMM9Q9Y5J7 89 aa13.12□□□□□ -0.31
USP8-208ENST00000559329 UBE2L5PA0A1B0GUS4 154 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 A0A1W2PPE3 182 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
USP8-208ENST00000559329 FCN3O75636 299 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 MMP23AO75900 390 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 HBE1P02100 147 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 OR52E5Q8NH55 327 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 RNASE6Q93091 150 aaKnown RBP13.11□□□□□ -0.31
USP8-208ENST00000559329 RBMXL1Q96E39 390 aaKnown RBP13.11□□□□□ -0.31
USP8-208ENST00000559329 VSIRQ9H7M9 311 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 LINC00312Q9Y6C7 94 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 TRGV8A0A0C4DH27 118 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 TMPRSS2O15393 492 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 ARG1P05089 322 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 NQO2P16083 231 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 CA7P43166 264 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 OR2B8PP59922 312 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 ZNF726P1Q15940 193 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 HFEQ30201 348 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 OR4S2Q8NH73 311 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 MBD3L1Q8WWY6 194 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 TMEM147Q9BVK8 224 aa13.11□□□□□ -0.31
USP8-208ENST00000559329 IGF2RP11717 2491 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 CEBPZOSA8MTT3 80 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 LY86O95711 162 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
USP8-208ENST00000559329 THBS3P49746 956 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 GNB2P62879 340 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 RELBQ01201 579 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 MEF2CQ06413 473 aaPredicted RBP13.1□□□□□ -0.31
USP8-208ENST00000559329 ICAM4Q14773 271 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 PRAMEF5Q5TYX0 476 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 SLC25A48Q6ZT89 311 aaKnown RBP13.1□□□□□ -0.31
USP8-208ENST00000559329 C1orf87Q8N0U7 546 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 PINX1Q96BK5 328 aaKnown RBP13.1□□□□□ -0.31
USP8-208ENST00000559329 HCFC1P51610 2035 aa13.1□□□□□ -0.31
USP8-208ENST00000559329 SMG1Q96Q15 3661 aaKnown RBP13.1□□□□□ -0.31
USP8-208ENST00000559329 RBMXL2O75526 392 aaKnown RBP13.09□□□□□ -0.31
USP8-208ENST00000559329 SPCS3P61009 180 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 MRPS11P82912 194 aaKnown RBP13.09□□□□□ -0.31
USP8-208ENST00000559329 SPINK9Q5DT21 86 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 ZNF383Q8NA42 475 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 OR10P1Q8NGE3 313 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 OR10A7Q8NGE5 316 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
USP8-208ENST00000559329 ADTRPQ96IZ2 230 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 TMEM106BQ9NUM4 274 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
USP8-208ENST00000559329 NDRG3Q9UGV2 375 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 POLEQ07864 2286 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 PPIAL4EA0A075B759 164 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 PPIAL4DF5H284 164 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
USP8-208ENST00000559329 PPIAL4FP0DN26 164 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 RAB2AP61019 212 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 ERVK-16P61578 105 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms